RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 XAB2Q9HCS7 855 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 S100A14Q9HCY8 104 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 BAG2O95816 211 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 C6orf222P0C671 652 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 CNTFP26441 200 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 BCAR1P56945 870 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 LAMTOR4Q0VGL1 99 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 BOLA3Q53S33 107 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 RABGAP1LQ5R372 815 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 FAM182AQ5T1J6 154 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 TRMT10BQ6PF06 316 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 ZNF534Q76KX8 674 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 WDR75Q8IWA0 830 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 ZBTB8OSQ8IWT0 167 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 C12orf42Q96LP6 360 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 TUBGCP5Q96RT8 1024 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 DDX50Q9BQ39 737 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 IL1RAPL1Q9NZN1 696 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 TBC1D30Q9Y2I9 924 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 M0QYV0 167 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 APOL1O14791 398 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 KLHL2O95198 593 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 PDGFRAP16234 1089 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 ORC1Q13415 861 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 HIC1Q14526 733 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 MROH9Q5TGP6 573 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 DNERQ8NFT8 737 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 PIWIL2Q8TC59 973 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 FAM172AQ8WUF8 416 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 NCSTNQ92542 709 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 HMGXB4Q9UGU5 601 aa15.37■□□□□ 0.05
SMARCA4-219ENST00000592604 CCNT2O60583 730 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 ZCCHC18P0CG32 403 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 PIM1P11309 404 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 TPSB2P20231 275 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 CXCL9Q07325 125 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 KRT81Q14533 505 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 TPSAB1Q15661 275 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 C15orf59Q2T9L4 293 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 MOCS1Q9NZB8 636 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 PCDHA11Q9Y5I1 949 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 DOCK1Q14185 1865 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 USP1O94782 785 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 KRT19P08727 400 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 VDRP11473 427 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 UBA1P22314 1058 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 L1CAMP32004 1257 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 FSTL1Q12841 308 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 EFHC1Q5JVL4 640 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 FAM160B1Q5W0V3 765 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 MBLAC2Q68D91 279 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 PGM2L1Q6PCE3 622 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 ZCCHC23Q6ZST2 131 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 RNF149Q8NC42 400 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 PCDH19Q8TAB3 1148 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 ZNF778Q96MU6 729 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 C2orf40Q9H1Z8 148 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 SMYD3Q9H7B4 428 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 AS3MTQ9HBK9 375 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 HEY1Q9Y5J3 304 aa15.36■□□□□ 0.05
SMARCA4-219ENST00000592604 IL18RAPO95256 599 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 APBA3O96018 575 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 CDK7P50613 346 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 PDE1BQ01064 536 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 TBC1D25Q3MII6 688 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 FASTKD1Q53R41 847 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 TEDDM1Q5T9Z0 273 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 ACAD11Q709F0 780 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 DHDDSQ86SQ9 333 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 PDSS2Q86YH6 399 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 TTLL6Q8N841 843 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 C1orf127Q8N9H9 656 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 ACMSDQ8TDX5 336 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 PCDH18Q9HCL0 1135 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 ACKR2O00590 384 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 BTKQ06187 659 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 SLC25A41Q8N5S1 370 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 RMI1Q9H9A7 625 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 DMAP1Q9NPF5 467 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 ITGA11Q9UKX5 1188 aa15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-219ENST00000592604 DPYSL4O14531 572 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 GAS2O43903 313 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 RNASEH1O60930 286 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 GCATO75600 419 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 METTL18O95568 372 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 FGF3P11487 239 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 PAX3P23760 479 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 GSTT1P30711 240 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 ERFP50548 548 aa15.34■□□□□ 0.05
SMARCA4-219ENST00000592604 OSTNP61366 133 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms