RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 STRIP2Q9ULQ0 834 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 SMC2O95347 1197 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 ZNF394Q53GI3 561 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 TRIM61Q5EBN2 209 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 PIGZQ86VD9 579 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 TMEFF1Q8IYR6 380 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 IPO4Q8TEX9 1081 aaKnown RBP19.8■□□□□ 0.76
CCDC43-205ENST00000592333 JAKMIP2Q96AA8 810 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 CHAMP1Q96JM3 812 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 SLC2A11Q9BYW1 496 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 OLA1Q9NTK5 396 aaKnown RBP19.8■□□□□ 0.76
CCDC43-205ENST00000592333 CHD8Q9HCK8 2581 aa19.8■□□□□ 0.76
CCDC43-205ENST00000592333 GOLGA6L4A6NEF3 574 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 PRRT4C9JH25 899 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 TRIM24O15164 1050 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 PPP1R2P41236 205 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 PRCPP42785 496 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 PTGER3P43115 390 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 NOVA1P51513 510 aaKnown RBP19.79■□□□□ 0.76
CCDC43-205ENST00000592333 ZNF445P59923 1031 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 DUOXA1Q1HG43 343 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 EGFLAMQ63HQ2 1017 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 MIB1Q86YT6 1006 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 ELOA2Q8IYF1 753 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-205ENST00000592333 SCML4Q8N228 414 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 TIGD1Q96MW7 591 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 CALCOCO1Q9P1Z2 691 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 CIZ1Q9ULV3 898 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-205ENST00000592333 CACNA1BQ00975 2339 aa19.79■□□□□ 0.76
CCDC43-205ENST00000592333 TNRC6BQ9UPQ9 1833 aaKnown RBP19.79■□□□□ 0.76
CCDC43-205ENST00000592333 UPK3BL1B0FP48 263 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 PATE3B3GLJ2 98 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 UPK3BL2E5RIL1 263 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 XPO1O14980 1071 aaKnown RBP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 PMM2O15305 246 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 KLKB1P03952 638 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 CYBBP04839 570 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 TBXAS1P24557 533 aaPredicted RBP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 BCAT1P54687 386 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 YWHAGP61981 247 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 RPL6Q02878 288 aaKnown RBP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 PNOCQ13519 176 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 ENPP2Q13822 863 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 EIF4HQ15056 248 aaKnown RBP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 FYB2Q5VWT5 728 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 PSAPL1Q6NUJ1 521 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 FAM217AQ8IXS0 508 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 UCMAQ8WVF2 138 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 PLD4Q96BZ4 506 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 METTL14Q9HCE5 456 aaKnown RBP19.78■□□□□ 0.76
CCDC43-205ENST00000592333 ZDHHC4Q9NPG8 344 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 MARCH2Q9P0N8 246 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 HESX1Q9UBX0 185 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 NUDT5Q9UKK9 219 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 SLC6A14Q9UN76 642 aa19.78■□□□□ 0.76
CCDC43-205ENST00000592333 IGHV1OR15-9A0A0B4J2B8 117 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 MDM4O15151 490 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TIMM44O43615 452 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 ZBED1O96006 694 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 SERPINF2P08697 491 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TKTL1P51854 596 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 ZNF33AQ06730 810 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 EFEMP1Q12805 493 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 CUL2Q13617 745 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 STARD3Q14849 445 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 ST3GAL2Q16842 350 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 SGO2Q562F6 1265 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TCERG1LQ5VWI1 586 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 FOXR2Q6PJQ5 311 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TOGARAM2Q6ZUX3 1019 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 RSRC2Q7L4I2 434 aaKnown RBP19.77■□□□□ 0.76
CCDC43-205ENST00000592333 SMYD4Q8IYR2 804 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-205ENST00000592333 FRMD1Q8N878 549 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 ENGASEQ8NFI3 743 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 KCTD13Q8WZ19 329 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TATDN2Q93075 761 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 IRX2Q9BZI1 471 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-205ENST00000592333 TMEM74BQ9NUR3 256 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 ARMCX3Q9UH62 379 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-205ENST00000592333 RASAL2Q9UJF2 1139 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 NFE2L3Q9Y4A8 694 aa19.77■□□□□ 0.76
CCDC43-205ENST00000592333 NDUFV2P19404 249 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 CORO1AP31146 461 aaKnown RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 MFAP3P55082 362 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 NUCB2P80303 420 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 PDE4CQ08493 712 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 BST2Q10589 180 aaKnown RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 STIM1Q13586 685 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 CBWD6Q4V339 395 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 CBWD3Q5JTY5 395 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 CBWD5Q5RIA9 395 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 SH3PXD2AQ5TCZ1 1133 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 ANKRD40Q6AI12 368 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 FOXJ1Q92949 421 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 SLC35C1Q96A29 364 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 ZNF419Q96HQ0 510 aaPredicted RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 MRGPRX1Q96LB2 322 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 ACOX2Q99424 681 aa19.76■□□□□ 0.75
CCDC43-205ENST00000592333 ARID3AQ99856 593 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms