RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PDCLQ13371 301 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 FZD5Q13467 585 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 TMEM110Q86TL2 294 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 ERICH1Q86X53 443 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 TMEM25Q86YD3 366 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 DHX40Q8IX18 779 aaKnown RBP10.52□□□□□ -0.73
BRCA1-227ENST00000591849 C1orf131Q8NDD1 294 aaKnown RBP10.52□□□□□ -0.73
BRCA1-227ENST00000591849 CLEC4CQ8WTT0 213 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 BHMTQ93088 406 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 RNF34Q969K3 372 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 NAA15Q9BXJ9 866 aaKnown RBP10.52□□□□□ -0.73
BRCA1-227ENST00000591849 GANQ9H2C0 597 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 FBRSL1Q9HCM7 1045 aaKnown RBP10.52□□□□□ -0.73
BRCA1-227ENST00000591849 ARHGEF4Q9NR80 690 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 SEPT11Q9NVA2 429 aaKnown RBP10.52□□□□□ -0.73
BRCA1-227ENST00000591849 DEC1Q9P2X7 70 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 MIA3Q5JRA6 1907 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 MYH10P35580 1976 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 PTPRDP23468 1912 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 PROB1E7EW31 1015 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 F8VZ95 297 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 PAPSS1O43252 624 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 MSI1O43347 362 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 RNF40O75150 1001 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 GABBR2O75899 941 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 KAT7O95251 611 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 CCDC172P0C7W6 258 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 GBP1P32455 592 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 OPRD1P41143 372 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 EIF2DP41214 584 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 GRIA2P42262 883 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 SLC11A2P49281 568 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 TBX4P57082 545 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 YWHAZP63104 245 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 CDK17Q00537 523 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 CCINQ13939 588 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 TRIP4Q15650 581 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 ZSCAN23Q3MJ62 389 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 C2orf27AQ580R0 203 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 DCAF6Q58WW2 860 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 NAIF1Q69YI7 327 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 GRAMD4Q6IC98 578 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 MSANTD2Q6P1R3 559 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 TSSK4Q6SA08 328 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 Q6ZS52 159 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 TOGARAM2Q6ZUX3 1019 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 BHLHA9Q7RTU4 235 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 DDI1Q8WTU0 396 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 ACDQ96AP0 544 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 SERPINB11Q96P15 392 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 ERGIC2Q96RQ1 377 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 DDX50Q9BQ39 737 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 POPDC2Q9HBU9 364 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 CBX8Q9HC52 389 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 DNAJC17Q9NVM6 304 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 SLC12A6Q9UHW9 1150 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 CYTH4Q9UIA0 394 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 AGO1Q9UL18 857 aaKnown RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 NAALADL1Q9UQQ1 740 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 SIK3Q9Y2K2 1263 aa10.51□□□□□ -0.73
BRCA1-227ENST00000591849 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 FAM170AA1A519 330 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 HOXC11O43248 304 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 TSPAN3O60637 253 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 APOEP02649 317 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 KLKB1P03952 638 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 MMEP08473 750 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 TYRP14679 529 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 RPL34P49207 117 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 RNASE9P60153 205 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 FOXK2Q01167 660 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 SATB1Q01826 763 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 IQCB1Q15051 598 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF528Q3MIS6 628 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 NUGGCQ68CJ6 796 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 HEATR6Q6AI08 1181 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 DPY19L2P1Q6NXN4 242 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 Q6ZNB5 142 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 NOP9Q86U38 636 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 LUZP1Q86V48 1076 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF677Q86XU0 584 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 CCDC117Q8IWD4 279 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 WDTC1Q8N5D0 677 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 RPLP0P6Q8NHW5 317 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 DQX1Q8TE96 717 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 C18orf8Q96DM3 657 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 TMA16Q96EY4 203 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 CPXM1Q96SM3 734 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 FUCA2Q9BTY2 467 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
BRCA1-227ENST00000591849 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 R4GN57 208 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 DCHS1Q96JQ0 3298 aa10.5□□□□□ -0.73
BRCA1-227ENST00000591849 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms