RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 MSANTD4Q8NCY6 345 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 C1orf131Q8NDD1 294 aaKnown RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 IPO4Q8TEX9 1081 aaKnown RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 EDEM1Q92611 657 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 ATOH1Q92858 354 aaPredicted RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 FAM149B1Q96BN6 582 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 CHFRQ96EP1 664 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 PNKPQ96T60 521 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 FAM126AQ9BYI3 521 aaPredicted RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 POPDC2Q9HBU9 364 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 CBX8Q9HC52 389 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 NLRC4Q9NPP4 1024 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 TMEM51Q9NW97 253 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 ASNSD1Q9NWL6 643 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 MARK1Q9P0L2 795 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 CYTH4Q9UIA0 394 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
TPM4-207ENST00000588032 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
TPM4-207ENST00000588032 A0A1W2PQC6 194 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 SCAMP3O14828 347 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 GFPT2O94808 682 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 SERPINC1P01008 464 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 KLKB1P03952 638 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 PNMA6AP0CW24 399 aaPredicted RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 CORO1AP31146 461 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 NRLP54845 237 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 NHLH1Q02575 133 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 RING1Q06587 406 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 GAB4Q2WGN9 574 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 ANO4Q32M45 955 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 NUGGCQ68CJ6 796 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 TRIM72Q6ZMU5 477 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 CACNA2D4Q7Z3S7 1137 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 NOP9Q86U38 636 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 TMEM25Q86YD3 366 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 PASD1Q8IV76 773 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 CPXM2Q8N436 756 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 EPS8L1Q8TE68 723 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 CLEC4CQ8WTT0 213 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 WBP2Q969T9 261 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 AZIN2Q96A70 460 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 CPXM1Q96SM3 734 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 BBS2Q9BXC9 721 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 SYNCQ9H7C4 482 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 FBRSL1Q9HCM7 1045 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 DEC1Q9P2X7 70 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 STOML2Q9UJZ1 356 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 AGO1Q9UL18 857 aaKnown RBP10.55□□□□□ -0.72
TPM4-207ENST00000588032 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 ZNF318Q5VUA4 2279 aa10.55□□□□□ -0.72
TPM4-207ENST00000588032 A0A1B0GTH6 734 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 CHURC1-FNTBB4DL54 471 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 EPHB6O15197 1021 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 CACNG3O60359 315 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 HSF2BPO75031 334 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 PAPSS2O95340 614 aaPredicted RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 EGFP01133 1207 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 CYBBP04839 570 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 APODP05090 189 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 FYNP06241 537 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 HMBSP08397 361 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 SP9P0CG40 484 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 HOXA6P31267 233 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 GBP1P32455 592 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 SCNN1AP37088 669 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 PLA2G5P39877 138 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 GRIA2P42262 883 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 TNFRSF4P43489 277 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 GABRB2P47870 512 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 SLC11A2P49281 568 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 CDR2Q01850 454 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 MTA1Q13330 715 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 NR1I3Q14994 352 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 HSF5Q4G112 596 aaPredicted RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 ADGRF1Q5T601 910 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 ZC3H14Q6PJT7 736 aaKnown RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 LUZP1Q86V48 1076 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 ERICH1Q86X53 443 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 DENND1CQ8IV53 801 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 ETFBKMTQ8IXQ9 262 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 FAM217AQ8IXS0 508 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 MAML2Q8IZL2 1156 aaPredicted RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 C18orf8Q96DM3 657 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 DDX50Q9BQ39 737 aaKnown RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 EDEM3Q9BZQ6 932 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 SEMA4AQ9H3S1 761 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 PRMT8Q9NR22 394 aaPredicted RBP10.54□□□□□ -0.72
TPM4-207ENST00000588032 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms