RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 CCP110O43303 1012 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 KRT86O43790 486 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 MOCS3O95396 460 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 DDX6P26196 483 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 GBP1P32455 592 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 TUBP50607 506 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ZNF143P52747 638 aaPredicted RBP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 SLC25A52Q3SY17 297 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 LEXMQ3ZCV2 418 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 SCYL2Q6P3W7 929 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ARCQ7LC44 396 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 REXO1L1PQ8IX06 675 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 C17orf53Q8N3J3 647 aaPredicted RBP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ZSCAN18Q8TBC5 510 aaPredicted RBP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 SUSD6Q92537 303 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 NPY6RQ99463 290 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 DDIT4Q9NX09 232 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 CPQQ9Y646 472 aa12.91□□□□□ -0.34
CDK5R1-202ENST00000584716 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 BTNL10A8MVZ5 291 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 DESP17661 470 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 PTPN9P43378 593 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 KCNQ1P51787 676 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 TBX4P57082 545 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 ZXDBP98169 803 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 OTUD1Q5VV17 481 aaPredicted RBP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 PTCRAQ6ISU1 281 aaPredicted RBP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 CPNE8Q86YQ8 564 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 ARID3BQ8IVW6 561 aaPredicted RBP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 ZNF276Q8N554 614 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 SERPINB11Q96P15 392 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 CNPY3Q9BT09 278 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 KLF16Q9BXK1 252 aaPredicted RBP12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 PIGVQ9NUD9 493 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 DENND4AQ7Z401 1863 aa12.9□□□□□ -0.34
CDK5R1-202ENST00000584716 HELZP42694 1942 aaKnown RBP12.9□□□□□ -0.35
CDK5R1-202ENST00000584716 DPYSL4O14531 572 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 SCAMP3O14828 347 aaKnown RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 RNF8O76064 485 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 MTA2O94776 668 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 OLFM2O95897 454 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 LAMP2P13473 410 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 TNNT1P13805 278 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 VIPR2P41587 438 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 SLC7A9P82251 487 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 COG7P83436 770 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 TRIP4Q15650 581 aaPredicted RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 DAAM2Q86T65 1068 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 USP13Q92995 863 aaPredicted RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 NT5C3BQ969T7 300 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 WBP2Q969T9 261 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 RPGRIP1Q96KN7 1286 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 GOLPH3Q9H4A6 298 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 WDCPQ9H6R7 721 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 RRN3Q9NYV6 651 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 GDE1Q9NZC3 331 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 PCSK1NQ9UHG2 260 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 CUL9Q8IWT3 2517 aa12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
CDK5R1-202ENST00000584716 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 LEFTY2O00292 366 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 IRAK2O43187 625 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 BUB1BO60566 1050 aaPredicted RBP12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 PALMO75781 387 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 PROSCO94903 275 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 ENDOD1O94919 500 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 PRAMEF12O95522 483 aa12.88□□□□□ -0.35
CDK5R1-202ENST00000584716 MOCS2O96007 188 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms