RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PAQR9Q6ZVX9 377 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 USP6NLQ92738 828 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 AGAP3Q96P47 875 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CSPG4P5Q96PW8 444 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZIC5Q96T25 663 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 APOL2Q9BQE5 337 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ACTR5Q9H9F9 607 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PPME1Q9Y570 386 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 WDR27A2RRH5 827 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SULT1E1P49888 294 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NR1H3Q13133 447 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 XRCC4Q13426 336 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CST9Q5W186 159 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 C16orf46Q6P387 395 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NOTUMQ6P988 496 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ADGRD1Q6QNK2 874 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ALKAL1Q6UXT8 129 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 UNC5AQ6ZN44 842 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ADGRF2Q8IZF7 708 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 BANPQ8N9N5 519 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 BEST2Q8NFU1 509 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TTC25Q96NG3 672 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SNX25Q9H3E2 840 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ABHD16BQ9H3Z7 469 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DTLQ9NZJ0 730 aa11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZC3H7BQ9UGR2 993 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-225ENST00000582482 HMX2A2RU54 273 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 E7ESA3 106 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 EDF1O60869 148 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 DNAJC8O75937 253 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 AP1B1Q10567 949 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CASC4Q6P4E1 433 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CXCL17Q6UXB2 119 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CROCCP2Q86T23 111 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MTDHQ86UE4 582 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 KLHL29Q96CT2 875 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GAD1Q99259 594 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 C20orf27Q9GZN8 174 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PIGVQ9NUD9 493 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 UBP1Q9NZI7 540 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ARMCX1Q9P291 453 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NUDT5Q9UKK9 219 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PSAT1Q9Y617 370 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SHROOM3Q8TF72 1996 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GOLGA8TH3BQL2 631 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PIRO00625 290 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PRPF4O43172 522 aaKnown RBP eCLIP11.08□□□□□ -0.641e-5■■■■□ 19.3
CDK5RAP3-225ENST00000582482 LPXNO60711 386 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 F2P00734 622 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MT-ND3P03897 115 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NQO1P15559 274 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CPA2P48052 419 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PGFP49763 221 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PSEN2P49810 448 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 LILRA4P59901 499 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 BNIP1Q12981 228 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PDK4Q16654 411 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 EML3Q32P44 896 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TAF1BQ53T94 588 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 RFX8Q6ZV50 586 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CCNYQ8ND76 341 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 C10orf82Q8WW14 230 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TMEM209Q96SK2 561 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MED10Q9BTT4 135 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NOD2Q9HC29 1040 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 KLHL14Q9P2G3 628 aa11.08□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SLC15A5A6NIM6 579 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 USP17L7P0C7H9 530 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 T-ENOLP0DO92 83 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NEFHP12036 1026 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CLCNKBP51801 687 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GTF2A1P52655 376 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GSCP56915 257 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CAP1Q01518 475 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms