RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	RPL17	P18621	184 aa	Known RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	GPD1	P21695	349 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	FBL	P22087	321 aa	Known RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ITPKB	P27987	946 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PCSK6	P29122	969 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PRKAR2B	P31323	418 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ALDH9A1	P49189	494 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PDE6C	P51160	858 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	DGKE	P52429	567 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ATXN1	P54253	815 aa	Known RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	SUMO3	P55854	103 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	WDR43	Q15061	677 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	CNGA2	Q16280	664 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	LONRF1	Q17RB8	773 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	GRAMD1B	Q3KR37	738 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ZIK1	Q3SY52	487 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	FAM153C	Q494X1	144 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PLA1A	Q53H76	456 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	AKNAD1	Q5T1N1	836 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ANKRD16	Q6P6B7	361 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MAVS	Q7Z434	540 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	SRL	Q86TD4	932 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MICU3	Q86XE3	530 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ZNF280B	Q86YH2	543 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	SLC15A3	Q8IY34	581 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	FAM186B	Q8IYM0	893 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ATG4A	Q8WYN0	398 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	SARAF	Q96BY9	339 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	LTV1	Q96GA3	475 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ZNF764	Q96H86	408 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	HAPLN3	Q96S86	360 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	BTBD1	Q9H0C5	482 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	CXorf36	Q9H7Y0	433 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	GLOD4	Q9HC38	313 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	CPNE5	Q9HCH3	593 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PLCB1	Q9NQ66	1216 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	XPNPEP3	Q9NQH7	507 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ARHGEF3	Q9NR81	526 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	BABAM1	Q9NWV8	329 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ASB6	Q9NWX5	421 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	STK32B	Q9NY57	414 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PTGFRN	Q9P2B2	879 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ARPP21	Q9UBL0	812 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	CPNE7	Q9UBL6	633 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	AFF4	Q9UHB7	1163 aa	Known RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	LTN1	O94822	1766 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MAP3K5	Q99683	1374 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	TMEM233	B4DJY2	109 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	hCG_1984214	I3L0E3	225 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	PQBP1	O60828	265 aa	Known RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	TCEA3	O75764	348 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	C1R	P00736	705 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	CSF1R	P07333	972 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	EBLN1	P0CF75	366 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ZKSCAN1	P17029	563 aa	Predicted RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	NDUFB7	P17568	137 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	DRD4	P21917	467 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	KCNA3	P22001	575 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	KLRC1	P26715	233 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	PIK3CB	P42338	1070 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	CCT8	P50990	548 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	CASP5	P51878	434 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	FMO1	Q01740	532 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	NHLH1	Q02575	133 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	LMOD3	Q0VAK6	560 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	INSC	Q1MX18	579 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	MTHFSD	Q2M296	383 aa	Known RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	TMEM95	Q3KNT9	176 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	INO80D	Q53TQ3	878 aa	Predicted RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	C1orf141	Q5JVX7	400 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	TREML2	Q5T2D2	321 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	TSTD2	Q5T7W7	516 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	DCAF12L1	Q5VU92	463 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	DPY19L2P1	Q6NXN4	242 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	PKD1L3	Q7Z443	1732 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	WDR53	Q7Z5U6	358 aa	Predicted RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ZNF575	Q86XF7	245 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ENAH	Q8N8S7	591 aa	Predicted RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	OR56A3	Q8NH54	315 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	SPSB4	Q96A44	273 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	PPP1R9B	Q96SB3	815 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	MYD88	Q99836	296 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ZNF287	Q9HBT7	754 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	IL17RB	Q9NRM6	502 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	SACM1L	Q9NTJ5	587 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	TRMT13	Q9NUP7	481 aa	Known RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	OGDHL	Q9ULD0	1010 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ST3GAL5	Q9UNP4	418 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	MRPS17	Q9Y2R5	130 aa	Known RBP	3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	ADAMTS7	Q9UKP4	1686 aa		3.74	□□□□□ -1.81
MSI2-215	ENST00000582453	IL16	Q14005	1332 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	MAPK8IP3	Q9UPT6	1336 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	KDM6A	O15550	1401 aa	Predicted RBP	3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	WNK3	Q9BYP7	1800 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453		A1L4Q6	167 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	PYCARD-AS1	I3L0S3	204 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	CCP110	O43303	1012 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	HMOX1	P09601	288 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	SETSIP	P0DME0	302 aa		3.73	□□□□□ -1.81
MSI2-215	ENST00000582453	JUP	P14923	745 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms