RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SIM1P81133 766 aaPredicted RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 ENPP2Q13822 863 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CEP135Q66GS9 1140 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 RABEPKQ7Z6M1 372 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 METTL3Q86U44 580 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 TAS1R2Q8TE23 839 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 GTPBP2Q9BX10 602 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 DUSP16Q9BY84 665 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC6A17Q9H1V8 727 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CD93Q9NPY3 652 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CACNA2D2Q9NY47 1150 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 USP25Q9UHP3 1055 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 LSM7Q9UK45 103 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 RAD54BQ9Y620 910 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 FAM208BQ5VWN6 2430 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 FAM237AA0A1B0GTK4 181 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 A0A1B0GVL5 298 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 SRRM3A6NNA2 597 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 ZBTB24O43167 697 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 OPHN1O60890 802 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 CLSTN1O94985 981 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIM49P0CI25 452 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIM49CP0CI26 452 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PFKFB1P16118 471 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 GCLMP48507 274 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PSEN1P49768 467 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 MFAP3P55082 362 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 SLC14A1Q13336 389 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PPP1R26Q5T8A7 1209 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 FYB2Q5VWT5 728 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 MINDY1Q8N5J2 469 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 RBBP8NLQ8NC74 664 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 JAKMIP2Q96AA8 810 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 ERLEC1Q96DZ1 483 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PIWIL1Q96J94 861 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 HSPA12BQ96MM6 686 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 FAM124BQ9H5Z6 455 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 ITM2CQ9NQX7 267 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PLK2Q9NYY3 685 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 THAP10Q9P2Z0 257 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 NAGPAQ9UK23 515 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 KLK13Q9UKR3 277 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 STON1Q9Y6Q2 735 aa11.2□□□□□ -0.62
CSNK1D-210ENST00000579308 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 H0Y626 953 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 NPC1O15118 1278 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIM16O95361 564 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 SYPP08247 313 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 C7P10643 843 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 NR2F2P24468 414 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 CD6P30203 668 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 GTF2H1P32780 548 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 ZNF132P52740 706 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 ATXN3P54252 364 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 COG7P83436 770 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 GEN1Q17RS7 908 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 FUT11Q495W5 492 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 RAB41Q5JT25 222 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 TADA2BQ86TJ2 420 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 SEMA4DQ92854 862 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 BHMTQ93088 406 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 WSB2Q9NYS7 404 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 USP36Q9P275 1121 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 CLEC4EQ9ULY5 219 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
CSNK1D-210ENST00000579308 KCNJ18B7U540 433 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 SH3BP5O60239 455 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 KIF20AO95235 890 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 IGLV3-19P01714 112 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 RALAP11233 206 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 CD58P19256 250 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 CHKAP35790 457 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 IL12RB1P42701 662 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 DPYDQ12882 1025 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms