RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	SLC2A3	P11169	496 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PSMA2	P25787	234 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PTPN9	P43378	593 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ZNF143	P52747	638 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	NAP1L1	P55209	391 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLC7A9	P82251	487 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	NNT	Q13423	1086 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ACAP1	Q15027	740 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TAF5	Q15542	800 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SMAD2	Q15796	467 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLC25A52	Q3SY17	297 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARHGAP29	Q52LW3	1261 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	HFE2	Q6ZVN8	426 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	MTSS1L	Q765P7	747 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CELF5	Q8N6W0	485 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DQX1	Q8TE96	717 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	FNIP1	Q8TF40	1166 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RXFP2	Q8WXD0	754 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SMARCD2	Q92925	531 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RNF34	Q969K3	372 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PLD4	Q96BZ4	506 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PIWIL1	Q96J94	861 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DESI2	Q9BSY9	194 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DDX23	Q9BUQ8	820 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PACSIN1	Q9BY11	444 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DCLK3	Q9C098	648 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SMOC2	Q9H3U7	446 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	OSER1	Q9NX31	292 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ANAPC7	Q9UJX3	599 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	NAALADL1	Q9UQQ1	740 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ZNF510	Q9Y2H8	683 aa		11.76	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	MYO10	Q9HD67	2058 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TCRBV5S1A1T	A0A578	114 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLC12A8	A0AV02	714 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TMEM191C	A6NGB0	347 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	C2CD4B	A6NLJ0	364 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	BTNL10	A8MVZ5	291 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733		M0QYT0	321 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PJA2	O43164	708 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	COCH	O43405	550 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	OLFM2	O95897	454 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TRUB2	O95900	331 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	APOE	P02649	317 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RDX	P35241	583 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RFC1	P35251	1148 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	FLT3	P36888	993 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARHGAP25	P42331	645 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	HARS2	P49590	506 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DEUP1	Q05D60	604 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PIGH	Q14442	188 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TCEAL1	Q15170	157 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARL13B	Q3SXY8	428 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PPP1R15B	Q5SWA1	713 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	NUGGC	Q68CJ6	796 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ZNF662	Q6ZS27	426 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	STRADA	Q7RTN6	431 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DNAAF5	Q86Y56	855 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	MIB1	Q86YT6	1006 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	UNC45B	Q8IWX7	931 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	EMC1	Q8N766	993 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	JOSD2	Q8TAC2	188 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLC35G2	Q8TBE7	412 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	PGAP3	Q96FM1	320 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CNPY3	Q9BT09	278 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLC46A2	Q9BY10	475 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TDP1	Q9NUW8	608 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	DDIT4	Q9NX09	232 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	OBP2A	Q9NY56	170 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARHGAP26	Q9UNA1	814 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TLR6	Q9Y2C9	796 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SH3BP1	Q9Y3L3	701 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CPQ	Q9Y646	472 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ADGRG1	Q9Y653	693 aa		11.75	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	GOLGA6L9	A6NEM1	432 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	MTA2	O94776	668 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	FYN	P06241	537 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	LAMP2	P13473	410 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CCR1	P32246	355 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TBX4	P57082	545 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RPL7A	P62424	266 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RING1	Q06587	406 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	NME3	Q13232	169 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TRIP4	Q15650	581 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	HADH	Q16836	314 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CDO1	Q16878	200 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	STXBP5	Q5T5C0	1151 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	SYPL2	Q5VXT5	272 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	TAC4	Q86UU9	113 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	YAF2	Q8IY57	180 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	GJD3	Q8N144	294 aa		11.74	□□□□□ -0.53
CDK5RAP3-210	ENST00000578733	RNF10	Q8N5U6	811 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms