RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ZNF212Q9UDV6 495 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 PRRC2BQ5JSZ5 2229 aaKnown RBP18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 SERPINE1P05121 402 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 MAPTP10636 758 aaKnown RBP18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 MAPRE2Q15555 327 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 SLC10A4Q96EP9 437 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 MRPL40Q9NQ50 206 aaKnown RBP18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 ALADP13716 330 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 SGO1Q5FBB7 561 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 ULK2Q8IYT8 1036 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 C12orf29Q8N999 325 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 RDM1Q8NG50 284 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 FRMD8Q9BZ67 464 aaPredicted RBP18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 C5orf60A6NFR6 353 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 TPP1O14773 563 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 PAEPP09466 180 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NFKBIAP25963 317 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 GMPSP49915 693 aaPredicted RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 CMC1Q7Z7K0 106 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SPATA6LQ8N4H0 392 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ATPAF2Q8N5M1 289 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 PPHLN1Q8NEY8 458 aaKnown RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 GIPC2Q8TF65 315 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ULK4Q96C45 1275 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 TUBGCP3Q96CW5 907 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 VPS50Q96JG6 964 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 TMEM79Q9BSE2 394 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 E5RI56 91 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SRP72O76094 671 aaKnown RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 PARNO95453 639 aaKnown RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 MGAT5Q09328 741 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 TAS2R42Q7RTR8 314 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ARHGAP22Q7Z5H3 698 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 OR6Y1Q8NGX8 325 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 EDEM1Q92611 657 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ZNF229Q9UJW7 825 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NFAT5O94916 1531 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NCF1BA6NI72 391 aaPredicted RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NCF1CA8MVU1 366 aaPredicted RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 IL18RAPO95256 599 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 CFHP08603 1231 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NCF1P14598 390 aaPredicted RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 TCF4P15884 667 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 BACE1P56817 501 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SPDYAQ5MJ70 313 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 PNPOQ9NVS9 261 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SLC5A4Q9NY91 659 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 PKD2L2Q9NZM6 624 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
ATPAF1-214ENST00000576409 SPDYE5A6NIY4 337 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 SPTLC1O15269 473 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 GRK2P25098 689 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 MPP2Q14168 576 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 INPP5AQ14642 412 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 C16orf72Q14CZ0 275 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 PDK2Q15119 407 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 UGP2Q16851 508 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 FOXR2Q6PJQ5 311 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 ABI1Q8IZP0 508 aa18.39■□□□□ 0.54
ATPAF1-214ENST00000576409 CCNE2O96020 404 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 OTUD3Q5T2D3 398 aaPredicted RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 VWA5B1Q5TIE3 1220 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 BRSK2Q8IWQ3 736 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 APBA2Q99767 749 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 CADM1Q9BY67 442 aaKnown RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF395Q9H8N7 513 aaPredicted RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 LRRC40Q9H9A6 602 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 KCNK4Q9NYG8 393 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 VWA5AO00534 786 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 CLK2P49760 499 aaKnown RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 CXCL9Q07325 125 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 PPIDQ08752 370 aaKnown RBP18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 TAF5Q15542 800 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 RBBP7Q16576 425 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 TTC39CQ8N584 583 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 PHACTR1Q9C0D0 580 aa18.39■□□□□ 0.53
ATPAF1-214ENST00000576409 RNF103O00237 685 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TRIM13O60858 407 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 PIGNO95427 931 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 EPHA3P29320 983 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 BLMHQ13867 455 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 IMPG1Q17R60 797 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 SLC44A4Q53GD3 710 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 PCYOX1LQ8NBM8 494 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ZBTB18Q99592 522 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 OMDQ99983 421 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ACOT9Q9Y305 439 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 NR2E3Q9Y5X4 410 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 CASZ1Q86V15 1759 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 PEX10O60683 326 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TPBGLP0DKB5 382 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms