RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RPS6KA4O75676 772 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 KRT38O76015 456 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 GH2P01242 217 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 C4BPAP04003 597 aaKnown RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 THRAP10827 490 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 FGF3P11487 239 aaPredicted RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 COX4I1P13073 169 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 RFC1P35251 1148 aaPredicted RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 SLC25A11Q02978 314 aaKnown RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 ZNF772Q68DY9 489 aaPredicted RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 TMEM179Q6ZVK1 233 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ARCQ7LC44 396 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 PATL1Q86TB9 770 aaKnown RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 KIAA0319LQ8IZA0 1049 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 TRIML2Q8N7C3 387 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 RNF148Q8N7C7 305 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 KCTD6Q8NC69 237 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 HSPH1Q92598 858 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 KCNK16Q96T55 309 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 CALN1Q9BXU9 219 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 TBC1D22BQ9NU19 505 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 RRN3Q9NYV6 651 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 THEGQ9P2T0 379 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ZNF180Q9UJW8 692 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ARHGAP26Q9UNA1 814 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 NUB1Q9Y5A7 615 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 AIM2O14862 343 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ZBTB14O43829 449 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 FOXD2O60548 495 aaPredicted RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 KLHL41O60662 606 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 CALB1P05937 261 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ARRB2P32121 409 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 PSMD7P51665 324 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ADGRE1Q14246 886 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ANKDD1AQ495B1 522 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 BORAQ6PGQ7 559 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 POTEHQ6S545 545 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 LPCAT2Q7L5N7 544 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 SH3BP5LQ7L8J4 393 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 ERI1Q8IV48 349 aaKnown RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 ALDH16A1Q8IZ83 802 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 IL31RAQ8NI17 732 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 CCT7Q99832 543 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 POPDC2Q9HBU9 364 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 PNPLA8Q9NP80 782 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 CNTNAP4Q9C0A0 1308 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 CNTNAP2Q9UHC6 1331 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 LRCH4O75427 683 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 MLH1P40692 756 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 NLRP11P59045 1033 aaKnown RBP14.87□□□□□ -0.03
SMG6-215ENST00000574501 MMRN1Q13201 1228 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 KCTD21Q4G0X4 260 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 Q6ZNX1 250 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 TSPAN14Q8NG11 270 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 JOSD2Q8TAC2 188 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 GIPC3Q8TF64 312 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 PKP2Q99959 881 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 EHMT1Q9H9B1 1298 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 PI4KBQ9UBF8 816 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 TJP2Q9UDY2 1190 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 RIMS3Q9UJD0 308 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 EP400Q96L91 3159 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 MAP3K6O95382 1288 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 PRKCHP24723 683 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 ROR1Q01973 937 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 SMAD1Q15797 465 aaKnown RBP14.87□□□□□ -0.03
SMG6-215ENST00000574501 NRF1Q16656 503 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 N4BP2L1Q5TBK1 243 aaPredicted RBP14.87□□□□□ -0.03
SMG6-215ENST00000574501 EMC1Q8N766 993 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 GFM2Q969S9 779 aaKnown RBP14.87□□□□□ -0.03
SMG6-215ENST00000574501 SORT1Q99523 831 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 SLC17A6Q9P2U8 582 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 DOLKQ9UPQ8 538 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 WDR37Q9Y2I8 494 aa14.87□□□□□ -0.03
SMG6-215ENST00000574501 SH3PXD2BA1X283 911 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 ITGBL1O95965 494 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 XRCC1P18887 633 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 SERPINB5P36952 375 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 GMPRP36959 345 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 NUDT2P50583 147 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 FLOT2Q14254 428 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 USP41Q3LFD5 358 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 UNC5AQ6ZN44 842 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 CAND1Q86VP6 1230 aaKnown RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 TICAM1Q8IUC6 712 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 C10orf107Q8IVU9 208 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 TEKT1Q969V4 418 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 MKS1Q9NXB0 559 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 EMCNQ9ULC0 261 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 ZNF541Q9H0D2 1346 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 H7C0C1 242 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 APOC4-APOC2K7ER74 178 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms