RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 CAPN9O14815 690 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 NCAM2O15394 837 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 CYP1A1P04798 512 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 FERP16591 822 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 CORO1AP31146 461 aaKnown RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 OPRD1P41143 372 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 NOMO3P69849 1222 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 PITX1P78337 314 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 SLC6A3Q01959 620 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 TRIP4Q15650 581 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 EFHC1Q5JVL4 640 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 PHLDB2Q86SQ0 1253 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 DENND1CQ8IV53 801 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 NAT16Q8N8M0 369 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 ADAM32Q8TC27 787 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 CLDN23Q96B33 292 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 C18orf8Q96DM3 657 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 P2RY13Q9BPV8 354 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 SYNCQ9H7C4 482 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 SPHK2Q9NRA0 654 aa13.58□□□□□ -0.24
CNOT1-213ENST00000568158 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-213ENST00000568158 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 ANTXRLA6NF34 631 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
CNOT1-213ENST00000568158 EGFP01133 1207 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 GABRB2P47870 512 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 TBX4P57082 545 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 SNX16P57768 344 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 RNASE9P60153 205 aaKnown RBP13.57□□□□□ -0.24
CNOT1-213ENST00000568158 AMPD2Q01433 879 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 GAD2Q05329 585 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 ANO4Q32M45 955 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 TMEM196Q5HYL7 178 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 OLFML1Q6UWY5 402 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 C12orf40Q86WS4 652 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 XYLT1Q86Y38 959 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 PRSS33Q8NF86 280 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 DQX1Q8TE96 717 aaKnown RBP13.57□□□□□ -0.24
CNOT1-213ENST00000568158 CD101Q93033 1021 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 P2RY11Q96G91 374 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 DCLK3Q9C098 648 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 TTYH3Q9C0H2 523 aa13.57□□□□□ -0.24
CNOT1-213ENST00000568158 HBS1LQ9Y450 684 aaKnown RBP13.57□□□□□ -0.24
CNOT1-213ENST00000568158 GOLGA6L7A0A1B0GV03 622 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 LSM8O95777 96 aaKnown RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 GLI1P08151 1106 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 ADH5P11766 374 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 SKILP12757 684 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 UNGP13051 313 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 TNFAIP3P21580 790 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 MESP2Q0VG99 397 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 GAS6Q14393 721 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 E4F1Q66K89 784 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 C1orf228Q6PIY5 440 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 BEND5Q7L4P6 421 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 TAC4Q86UU9 113 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 IPO4Q8TEX9 1081 aaKnown RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 BHMTQ93088 406 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 PLD4Q96BZ4 506 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 EDEM3Q9BZQ6 932 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 SEPT11Q9NVA2 429 aaKnown RBP13.56□□□□□ -0.24
CNOT1-213ENST00000568158 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 AIPL1Q9NZN9 384 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 MYO6Q9UM54 1294 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 ZNF510Q9Y2H8 683 aa13.56□□□□□ -0.24
CNOT1-213ENST00000568158 CACNA1IQ9P0X4 2223 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 TRIM24O15164 1050 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 AP5Z1O43299 807 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 TSPAN3O60637 253 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 TRUB2O95900 331 aaKnown RBP13.55□□□□□ -0.24
CNOT1-213ENST00000568158 ADH1CP00326 375 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 CCDC172P0C7W6 258 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 RPS9P46781 194 aaKnown RBP13.55□□□□□ -0.24
CNOT1-213ENST00000568158 HARS2P49590 506 aaKnown RBP13.55□□□□□ -0.24
CNOT1-213ENST00000568158 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
CNOT1-213ENST00000568158 TCF15Q12870 199 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 PTP4A2Q12974 167 aa13.55□□□□□ -0.24
CNOT1-213ENST00000568158 CCINQ13939 588 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms