RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 FTLP02792 175 aaPredicted RBP27.12■■□□□ 1.93
NME3-208ENST00000565379 PSMC3P17980 439 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 CYLC1P35663 651 aaPredicted RBP27.12■■□□□ 1.93
NME3-208ENST00000565379 YWHAZP63104 245 aaKnown RBP27.12■■□□□ 1.93
NME3-208ENST00000565379 FOXK2Q01167 660 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 PTP4A2Q12974 167 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 BSPRYQ5W0U4 402 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 FAM183BPQ6ZVS7 135 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 SLC26A9Q7LBE3 791 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 MCOLN2Q8IZK6 566 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 FAM149B1Q96BN6 582 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.12■■□□□ 1.93
NME3-208ENST00000565379 TJP2Q9UDY2 1190 aa27.12■■□□□ 1.93
NME3-208ENST00000565379 GVINP1Q7Z2Y8 2422 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 ZNF638Q14966 1978 aaKnown RBP27.11■■□□□ 1.93
NME3-208ENST00000565379 ARNTLO00327 626 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 RARGP13631 454 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 AVPR1AP37288 418 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 CCDC122Q5T0U0 273 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 C10orf76Q5T2E6 689 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 TXNDC8Q6A555 127 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 ARCQ7LC44 396 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 MFSD6LQ8IWD5 586 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 MAML2Q8IZL2 1156 aaPredicted RBP27.11■■□□□ 1.93
NME3-208ENST00000565379 CCDC112Q8NEF3 446 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 CLEC4CQ8WTT0 213 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 NMUR1Q9HB89 426 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 POPDC2Q9HBU9 364 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 TMEM51Q9NW97 253 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 TAS2R14Q9NYV8 317 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 NENFQ9UMX5 172 aa27.11■■□□□ 1.93
NME3-208ENST00000565379 TMCO5BA8MYB1 307 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 NRDCO43847 1150 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 TLR5O60602 858 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 OLFM2O95897 454 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 HDCP19113 662 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 ATP5C1P36542 298 aaKnown RBP27.1■■□□□ 1.93
NME3-208ENST00000565379 FZD5Q13467 585 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 CMTM8Q8IZV2 173 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 MAB21L3Q8N8X9 362 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 C3orf20Q8ND61 904 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 RNF139Q8WU17 664 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 DNASE1L2Q92874 299 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 ZFYVE19Q96K21 471 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 SLC46A2Q9BY10 475 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 NACA2Q9H009 215 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 TRPC7Q9HCX4 862 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 R4GN57 208 aa27.1■■□□□ 1.93
NME3-208ENST00000565379 GPR179Q6PRD1 2367 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 EP300Q09472 2414 aaPredicted RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 SOX9P48436 509 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 GFPT1Q06210 699 aaPredicted RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 FAM102AQ5T9C2 384 aaPredicted RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 RSRC2Q7L4I2 434 aaKnown RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 C1orf210Q8IVY1 113 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 ZNF687Q8N1G0 1237 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 TTC8Q8TAM2 541 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 DEPDC1BQ8WUY9 529 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 NDRG1Q92597 394 aaKnown RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 E2F7Q96AV8 911 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 PDLIM2Q96JY6 352 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 LUC7LQ9NQ29 371 aaKnown RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 OSER1Q9NX31 292 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 RRN3Q9NYV6 651 aa27.09■■□□□ 1.93
NME3-208ENST00000565379 NDRG2Q9UN36 371 aaKnown RBP27.09■■□□□ 1.93
NME3-208ENST00000565379 NUP210Q8TEM1 1887 aaPredicted RBP27.08■■□□□ 1.93
NME3-208ENST00000565379 C2orf78A6NCI8 922 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 CAPN9O14815 690 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 ZNF263O14978 683 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 SLC7A9P82251 487 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 KIF9Q9HAQ2 790 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 DNMT3LQ9UJW3 386 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 PIAS3Q9Y6X2 628 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 FRYLO94915 3013 aa27.08■■□□□ 1.93
NME3-208ENST00000565379 ANKRD62A6NC57 917 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 COCHO43405 550 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 IPO7O95373 1038 aaKnown RBP27.07■■□□□ 1.92
NME3-208ENST00000565379 LCA5LO95447 670 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 LMNAP02545 664 aaKnown RBP27.07■■□□□ 1.92
NME3-208ENST00000565379 SPA17Q15506 151 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 C10orf120Q5SQS8 335 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 IRF7Q92985 503 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 SLC2A13Q96QE2 648 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 SELENOOQ9BVL4 669 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 CCSER2Q9H7U1 834 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 PARVAQ9NVD7 372 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 SPATA6Q9NWH7 488 aaPredicted RBP27.07■■□□□ 1.92
NME3-208ENST00000565379 OBP2AQ9NY56 170 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 SCINQ9Y6U3 715 aa27.07■■□□□ 1.92
NME3-208ENST00000565379 OBSL1O75147 1896 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 MYO16Q9Y6X6 1858 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 EIF3CLB5ME19 914 aaKnown RBP27.06■■□□□ 1.92
NME3-208ENST00000565379 DAB1O75553 588 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 CKMP06732 381 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 SP9P0CG40 484 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 NCAM1P13591 858 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 PGFP49763 221 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 FCHO2Q0JRZ9 810 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 C2CD6Q53TS8 623 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 MSANTD2Q6P1R3 559 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms