RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CPEB3	Q8NE35	698 aa	Known RBP	4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	PPHLN1	Q8NEY8	458 aa	Known RBP	4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	MAML1	Q92585	1016 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF566	Q969W8	418 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	KIAA1191	Q96A73	305 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF768	Q9H5H4	540 aa	Known RBP	4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	ETAA1	Q9NY74	926 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	TMOD3	Q9NYL9	352 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	GPRC5B	Q9NZH0	403 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	TBC1D30	Q9Y2I9	924 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	SLC45A1	Q9Y2W3	748 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	RABGAP1	Q9Y3P9	1069 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	CHST2	Q9Y4C5	530 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	TESMIN	Q9Y4I5	508 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431	PCDHGB2	Q9Y5G2	931 aa		4.64	□□□□□ -1.67
LRRC28-222	ENST00000561431		A0A0B4J269	797 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CCDC78	A2IDD5	438 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	PABPN1L	A6NDY0	278 aa	Known RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	UNC119B	A6NIH7	251 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	NPIPB8	E9PQR5	432 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CDKL5	O76039	1030 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SUN1	O94901	812 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	HARS	P12081	509 aa	Known RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	MYL4	P12829	197 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	TPH1	P17752	444 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	FDXR	P22570	491 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	RRM1	P23921	792 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	LRPAP1	P30533	357 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	ATIC	P31939	592 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	DDIT3	P35638	169 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	TEC	P42680	631 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CLK1	P49759	484 aa	Known RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	WNT3	P56703	355 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	LOXL3	P58215	753 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	MC2R	Q01718	297 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	GUCY1B3	Q02153	619 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	TUBB3	Q13509	450 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	STARD3	Q14849	445 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	GEN1	Q17RS7	908 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	MTHFSD	Q2M296	383 aa	Known RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	ARMC6	Q6NXE6	501 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	FBXO38	Q6PIJ6	1188 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SMIM5	Q71RC9	77 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	PPP1R32	Q7Z5V6	425 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SYTL1	Q8IYJ3	562 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SPART	Q8N0X7	666 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CPXCR1	Q8N123	301 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	IL17D	Q8TAD2	202 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	POC1B	Q8TC44	478 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF483	Q8TF39	744 aa	Predicted RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	PPP2R3C	Q969Q6	453 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	PTCD3	Q96EY7	689 aa	Known RBP	4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SERINC2	Q96SA4	455 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	SEZ6L	Q9BYH1	1024 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	TPSD1	Q9BZJ3	242 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CHST8	Q9H2A9	424 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	NRDE2	Q9H7Z3	1164 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	GJB4	Q9NTQ9	266 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	TBCCD1	Q9NVR7	557 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	LUZP4	Q9P127	313 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CTTNBP2NL	Q9P2B4	639 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	PGAP2	Q9UHJ9	254 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	MID2	Q9UJV3	735 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CDC23	Q9UJX2	597 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	CEMIP	Q8WUJ3	1361 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431	MAP3K5	Q99683	1374 aa		4.63	□□□□□ -1.67
LRRC28-222	ENST00000561431		A0A1W2PRQ8	180 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431		A0A1W2PS29	197 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	GRXCR1	A8MXD5	290 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431		E7ENX8	843 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431		H7C4K7	107 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	HMMR	O75330	724 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	FGF18	O76093	207 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	RPN1	P04843	607 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ELANE	P08246	267 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	TXN	P10599	105 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	IDE	P14735	1019 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	FGFR2	P21802	821 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ACVR2A	P27037	513 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	IL1R2	P27930	398 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	PPM1A	P35813	382 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	PTDSS1	P48651	473 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF134	P52741	427 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	GEMIN4	P57678	1058 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	TAP2	Q03519	686 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	HNRNPA0	Q13151	305 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	BOP1	Q14137	746 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	TRIM14	Q14142	442 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ARHGEF7	Q14155	803 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	E2F2	Q14209	437 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	TAF11	Q15544	211 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	C1orf141	Q5JVX7	400 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	RBM20	Q5T481	1227 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ARHGAP40	Q5TG30	622 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZDHHC24	Q6UX98	284 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	RNF207	Q6ZRF8	634 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	MICALCL	Q6ZW33	695 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	EGFL6	Q8IUX8	553 aa		4.62	□□□□□ -1.67

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