RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 E9PBE3 544 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 AIM2O14862 343 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 BIRC5O15392 142 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 KCNN4O15554 427 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 KLHL41O60662 606 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 NELFEP18615 380 aaKnown RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 SFSWAPQ12872 951 aaKnown RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 N4BP2L1Q5TBK1 243 aaPredicted RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 MBLAC2Q68D91 279 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 UNC5AQ6ZN44 842 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 ZNF410Q86VK4 478 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 RNF148Q8N7C7 305 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 TBC1D22BQ9NU19 505 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 ZNF180Q9UJW8 692 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 CCPG1Q9ULG6 757 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 CNTNAP2Q9UHC6 1331 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 BTBD19C9JJ37 291 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 BOLA2-SMG1P6H3BVE0 249 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 APOEP02649 317 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 FGF3P11487 239 aaPredicted RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 COX4I1P13073 169 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 RPL26P61254 145 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 CDKL1Q00532 357 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 PLOD1Q02809 727 aaPredicted RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 THNSL1Q8IYQ7 743 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 TTLL6Q8N841 843 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 AGR3Q8TD06 166 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 FAM58BPP0C7Q3 252 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 TBXAS1P24557 533 aaPredicted RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 MTTPP55157 894 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 SULT2A1Q06520 285 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 RARS2Q5T160 578 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 ARCQ7LC44 396 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 CAND1Q86VP6 1230 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 MPP5Q8N3R9 675 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 SAMD3Q8N6K7 520 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 RIN3Q8TB24 985 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 DEPDC1BQ8WUY9 529 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 FAF1Q9UNN5 650 aaPredicted RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 WDR64B1ANS9 1081 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 GSRP00390 522 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 ARRB2P32121 409 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 RAB3IL1Q8TBN0 382 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 PPP4R1Q8TF05 950 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 DIS3LQ8TF46 1054 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 TMIGD2Q96BF3 282 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 KCNK16Q96T55 309 aa17.03■□□□□ 0.32
TPM1-228ENST00000560975 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
TPM1-228ENST00000560975 CFLARO15519 480 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 FBXO21O94952 628 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 PRKCHP24723 683 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 PSMC1P62191 440 aaKnown RBP17.02■□□□□ 0.32
TPM1-228ENST00000560975 LPIN1Q14693 890 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 PTPN20Q4JDL3 420 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 PPP1R2P3Q6NXS1 205 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 C10orf107Q8IVU9 208 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 AHI1Q8N157 1196 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 NIPA2Q8N8Q9 360 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 PPP1R36Q96LQ0 422 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 SIKE1Q9BRV8 207 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 FRMD8P1Q9BZ68 369 aaPredicted RBP17.02■□□□□ 0.32
TPM1-228ENST00000560975 C6orf203Q9P0P8 240 aaPredicted RBP17.02■□□□□ 0.32
TPM1-228ENST00000560975 EFR3BQ9Y2G0 817 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 HEY1Q9Y5J3 304 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 CEPT1Q9Y6K0 416 aa17.02■□□□□ 0.32
TPM1-228ENST00000560975 F5H423 210 aaPredicted RBP17.02■□□□□ 0.31
TPM1-228ENST00000560975 XPO1O14980 1071 aaKnown RBP17.02■□□□□ 0.31
TPM1-228ENST00000560975 CHADO15335 359 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 ZBTB14O43829 449 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 TBC1D12O60347 775 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 FUT4P22083 530 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 MIPP30301 263 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 DENND1BQ6P3S1 775 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 GABBR1Q9UBS5 961 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 EMCNQ9ULC0 261 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 RAB26Q9ULW5 256 aa17.02■□□□□ 0.31
TPM1-228ENST00000560975 TESPA1A2RU30 521 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 SLC15A5A6NIM6 579 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 DGKIO75912 1065 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 CD19P15391 556 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 CDH2P19022 906 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 SERPINB5P36952 375 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 NUDT2P50583 147 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 NTPCRQ9BSD7 190 aaKnown RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 ZNF696Q9H7X3 374 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 ANKEF1Q9NU02 776 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 UBIAD1Q9Y5Z9 338 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms