RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 DTWD2Q8NBA8 298 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 IL17RDQ8NFM7 739 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 STT3BQ8TCJ2 826 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 BSNDQ8WZ55 320 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CENPKQ9BS16 269 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SH2D4AQ9H788 454 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 LIN28AQ9H9Z2 209 aaKnown RBP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF287Q9HBT7 754 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 RXFP1Q9HBX9 757 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SPON1Q9HCB6 807 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CATSPERZQ9NTU4 200 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 WHRNQ9P202 907 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 DPP7Q9UHL4 492 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 TRIM33Q9UPN9 1127 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 ZBTB42B2RXF5 422 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 C2CD2LO14523 706 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SUN1O94901 812 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 ENPP1P22413 925 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 VHLP40337 213 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 MTNR1BP49286 362 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 KIF11P52732 1056 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 MTTPP55157 894 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 FOXO4P98177 505 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SF3A3Q12874 501 aaKnown RBP eCLIP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CUL1Q13616 776 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CCINQ13939 588 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 TRADDQ15628 312 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 LIN52Q52LA3 116 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 WASHC2DQ5SRD0 308 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 FIBCD1Q8N539 461 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 KREMEN2Q8NCW0 462 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SEPT1Q8WYJ6 367 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 VPS33AQ96AX1 596 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 HAUS1Q96CS2 278 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 TCHPQ9BT92 498 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 GRIP2Q9C0E4 1043 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 VPS16Q9H269 839 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 NHEJ1Q9H9Q4 299 aaPredicted RBP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 POLR2DO15514 142 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 UNC5CO95185 931 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MLYCDO95822 493 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 LMNAP02545 664 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ATP5BP06576 529 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 GM2AP17900 193 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MMP13P45452 471 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 LIMK1P53667 647 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 FMO1Q01740 532 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 COASYQ13057 564 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TUSC3Q13454 348 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 KRT71Q3SY84 523 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ANKRD36CQ5JPF3 1778 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 LBX2Q6XYB7 198 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZER1Q7Z7L7 766 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 NRAPQ86VF7 1730 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 FBXL16Q8N461 479 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 PIGBQ92521 554 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ABTB1Q969K4 478 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 SLC35A4Q96G79 324 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF764Q96H86 408 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 SNX27Q96L92 541 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 PSMB7Q99436 277 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 GPR63Q9BZJ6 419 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TBCCD1Q9NVR7 557 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 STOML1Q9UBI4 398 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TBC1D30Q9Y2I9 924 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 STXBP5LQ9Y2K9 1186 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZFP37Q9Y6Q3 630 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 GRID2IPA4D2P6 1211 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 BTBD19C9JJ37 291 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MUSKO15146 869 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 PLA2G6O60733 806 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZIC2O95409 532 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ALOX12P18054 663 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 EIF2AK2P19525 551 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 STIP1P31948 543 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 CPT1AP50416 773 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ADARP55265 1226 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ARF3P61204 181 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ARF1P84077 181 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MC1RQ01726 317 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MAP4K2Q12851 820 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TRIM28Q13263 835 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 SMUG1Q53HV7 270 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TCP11X2Q5H9J9 407 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 CFAP157Q5JU67 520 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 KIF18BQ86Y91 864 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 RIOX2Q8IUF8 465 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MAP7D3Q8IWC1 876 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF687Q8N1G0 1237 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 AGGF1Q8N302 714 aaeCLIP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 C7orf31Q8N865 590 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 NEK9Q8TD19 979 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 CREB3L4Q8TEY5 395 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 UBLCP1Q8WVY7 318 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 AK8Q96MA6 479 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms