RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-205ENST00000559898 ZNF806P0C7X5 589 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 VDRP11473 427 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 BCAT1P54687 386 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 CREB5Q02930 508 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 BST2Q10589 180 aaKnown RBP18.59■□□□□ 0.57
HDDC3-205ENST00000559898 KCNH2Q12809 1159 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 FYB2Q5VWT5 728 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 PMS2CLQ68D20 193 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 GJB7Q6PEY0 223 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 TTC39CQ8N584 583 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 LOXL4Q96JB6 756 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 NT5C1BQ96P26 610 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 ACP6Q9NPH0 428 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 MARCH2Q9P0N8 246 aa18.59■□□□□ 0.57
HDDC3-205ENST00000559898 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-205ENST00000559898 SPTBN2O15020 2390 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 SLC30A4O14863 429 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 PMM2O15305 246 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 MSI1O43347 362 aaKnown RBP18.58■□□□□ 0.56
HDDC3-205ENST00000559898 GABRG2P18507 467 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 PSEN1P49768 467 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 PAK1Q13153 545 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 GEN1Q17RS7 908 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 MAP7D1Q3KQU3 841 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 AASDHQ4L235 1098 aaPredicted RBP18.58■□□□□ 0.56
HDDC3-205ENST00000559898 ARMCX6Q7L4S7 300 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 DEFB119Q8N690 84 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 RBBP8NLQ8NC74 664 aaPredicted RBP18.58■□□□□ 0.56
HDDC3-205ENST00000559898 EHBP1Q8NDI1 1231 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 CACNA2D2Q9NY47 1150 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 FBXO10Q9UK96 956 aa18.58■□□□□ 0.56
HDDC3-205ENST00000559898 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.58■□□□□ 0.56
HDDC3-205ENST00000559898 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 BCLAF3A2AJT9 711 aaKnown RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 PENKP01210 267 aaPredicted RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 TBXAS1P24557 533 aaPredicted RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 P2RY2P41231 377 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 DGKGP49619 791 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 SGSHP51688 502 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 ZNF132P52740 706 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 DAOAP59103 153 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 FOXK2Q01167 660 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 GOLGA8FQ08AF8 430 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 GOLGA8DPQ0D2H9 430 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 USP39Q53GS9 565 aaKnown RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 EOGTQ5NDL2 527 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 BSPRYQ5W0U4 402 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 LCLAT1Q6UWP7 414 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 RSRC2Q7L4I2 434 aaKnown RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 TMEFF1Q8IYR6 380 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 NETO1Q8TDF5 533 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 SLC35F5Q8WV83 523 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 RTKNQ9BST9 563 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 INTS2Q9H0H0 1204 aaKnown RBP18.57■□□□□ 0.56
HDDC3-205ENST00000559898 LRRC4Q9HBW1 653 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
HDDC3-205ENST00000559898 ATXN2Q99700 1313 aaKnown RBP18.56■□□□□ 0.56
HDDC3-205ENST00000559898 NCOR2Q9Y618 2525 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 M0QYV0 167 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 TSPAN3O60637 253 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 HOXB2P14652 356 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 PTGER3P43115 390 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 TMEM215Q68D42 235 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 IRF2BP1Q8IU81 584 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 PGBD3Q8N328 593 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 CCDC26Q8TAB7 109 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 SORCS1Q8WY21 1168 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 XPO6Q96QU8 1125 aaKnown RBP18.56■□□□□ 0.56
HDDC3-205ENST00000559898 CRACR2AQ9BSW2 395 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 GTPBP4Q9BZE4 634 aaKnown RBP18.56■□□□□ 0.56
HDDC3-205ENST00000559898 TMEM74BQ9NUR3 256 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 KIAA1468Q9P260 1216 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 BCCIPQ9P287 314 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDDC3-205ENST00000559898 HESX1Q9UBX0 185 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 AJAP1Q9UKB5 411 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-205ENST00000559898 STARD13Q9Y3M8 1113 aa18.56■□□□□ 0.56
HDDC3-205ENST00000559898 BICDL2A1A5D9 508 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 RHOBTB1O94844 696 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 AFPP02771 609 aaKnown RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 PAEPP09466 180 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 NTSR1P30989 418 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 DHPSP49366 369 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 MFAP3P55082 362 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 MARSP56192 900 aaKnown RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 YWHAEP62258 255 aaKnown RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 COG7P83436 770 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 TRIP4Q15650 581 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 ELF2Q15723 593 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 DENND1BQ6P3S1 775 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 KCTD13Q8WZ19 329 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 PIWIL1Q96J94 861 aaKnown RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 FAM124BQ9H5Z6 455 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 POLMQ9NP87 494 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-205ENST00000559898 FSCN3Q9NQT6 498 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 CALCOCO1Q9P1Z2 691 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 CYTH4Q9UIA0 394 aa18.55■□□□□ 0.56
HDDC3-205ENST00000559898 GOLGA6L7A0A1B0GV03 622 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms