RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 RAB6CQ53S08 254 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 SH3PXD2AQ5TCZ1 1133 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 VITQ6UXI7 678 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ADHFE1Q8IWW8 467 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 PDLIM2Q96JY6 352 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ZFYVE19Q96K21 471 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 BTBD6Q96KE9 485 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
GABPB1-208ENST00000558970 SLC2A13Q96QE2 648 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
GABPB1-208ENST00000558970 TBCBQ99426 244 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 NUP85Q9BW27 656 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ADAM33Q9BZ11 813 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 RAB6CQ9H0N0 254 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ZFP14Q9HCL3 533 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
GABPB1-208ENST00000558970 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 EPS15L1Q9UBC2 864 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 TMEM59LQ9UK28 342 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 PCDHA13Q9Y5I0 950 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 SIGLEC16A6NMB1 481 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 GPR37L1O60883 481 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 OLFM2O95897 454 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 GLI1P08151 1106 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 MYBL1P10243 752 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 GPD1P21695 349 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 SDC4P31431 198 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 NOS2P35228 1153 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 MATKP42679 507 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 ATXN1P54253 815 aaKnown RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 SLC7A9P82251 487 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 CCZ1BP86790 482 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 CCZ1P86791 482 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 OGDHQ02218 1023 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 MAMLD1Q13495 774 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 HTR4Q13639 388 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 DAB2IPQ5VWQ8 1189 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 PLEKHA7Q6IQ23 1121 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 MTSS1LQ765P7 747 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 KIAA1328Q86T90 577 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 RNF34Q969K3 372 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 LRRC3BQ96PB8 259 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 STAP1Q9ULZ2 295 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 REXO2Q9Y3B8 237 aaKnown RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 HCN4Q9Y3Q4 1203 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-208ENST00000558970 SCINQ9Y6U3 715 aa12.96□□□□□ -0.33
GABPB1-208ENST00000558970 COL4A3Q01955 1670 aa12.96□□□□□ -0.34
GABPB1-208ENST00000558970 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 C2CD4BA6NLJ0 364 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TMEM110-MUSTN1A8MSY1 372 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 LOC730098B7Z3J9 87 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 CCP110O43303 1012 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 NRDCO43847 1150 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 STC2O76061 302 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 CYP1A2P05177 515 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TMEM253P0C7T8 217 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 PSMA2P25787 234 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 SCNN1AP37088 669 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TBX4P57082 545 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 DEUP1Q05D60 604 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 USP4Q13107 963 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 ZNF77Q15935 545 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 OTUD1Q5VV17 481 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TRIM68Q6AZZ1 485 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 MSANTD2Q6P1R3 559 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 DENND1CQ8IV53 801 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 CELF5Q8N6W0 485 aaKnown RBP12.95□□□□□ -0.34
GABPB1-208ENST00000558970 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 ZNF564Q8TBZ8 553 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-208ENST00000558970 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 SERPINB11Q96P15 392 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
GABPB1-208ENST00000558970 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms