RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MEA1Q16626 185 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 ANO4Q32M45 955 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 TMEM196Q5HYL7 178 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 PKN3Q6P5Z2 889 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 Q6ZNB5 142 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 FAM183BPQ6ZVS7 135 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 PHLDB2Q86SQ0 1253 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 DENND1CQ8IV53 801 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 RNF214Q8ND24 703 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 EPS8L1Q8TE68 723 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 CPA5Q8WXQ8 436 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 BHMTQ93088 406 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 CDK5RAP1Q96SZ6 601 aaKnown RBP14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 PCDHB18PQ96TA0 734 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 P2RY13Q9BPV8 354 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 TSPY26PQ9H489 355 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 FAM86C1Q9NVL1 165 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 SPATA6Q9NWH7 488 aaPredicted RBP14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 AGO1Q9UL18 857 aaKnown RBP14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 STRIP2Q9ULQ0 834 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 MIA3Q5JRA6 1907 aa14.45□□□□□ -0.1
TSPAN3-205ENST00000558745 NCAM2O15394 837 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 FMO1Q01740 532 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 ANGPT1Q15389 498 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 TSSK4Q6SA08 328 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 CACNA2D4Q7Z3S7 1137 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 MAML2Q8IZL2 1156 aaPredicted RBP14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 DEFB106AQ8N104 65 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 TMEM35BQ8NCS4 154 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 BAP1Q92560 729 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 CD101Q93033 1021 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 SPHK2Q9NRA0 654 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 PLK2Q9NYY3 685 aa14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-205ENST00000558745 GOLGA6L7A0A1B0GV03 622 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 ADH5P11766 374 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 UBASH3AP57075 661 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 RNASE9P60153 205 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 YWHAZP63104 245 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 TPM4P67936 248 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 CDR2Q01850 454 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 GRSF1Q12849 480 aaKnown RBP eCLIP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 CCINQ13939 588 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 TRIP4Q15650 581 aaPredicted RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 NAA35Q5VZE5 725 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 C1orf210Q8IVY1 113 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 SLC30A5Q8TAD4 765 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 DQX1Q8TE96 717 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 GOLGA1Q92805 767 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 MSANTD3Q96H12 275 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 SYNCQ9H7C4 482 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 OLA1Q9NTK5 396 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 IFNKQ9P0W0 207 aa14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 ZFHX2Q9C0A1 2572 aaPredicted RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 PTPRZ1P23471 2315 aaPredicted RBP14.43□□□□□ -0.1
TSPAN3-205ENST00000558745 SYNJ2BP-COX16A0A087WUM0 186 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 NEDD8-MDP1E9PL57 170 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 CAPN9O14815 690 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 TSPAN3O60637 253 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 CAVIN2O95810 425 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 ADH1CP00326 375 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 CDH5P33151 784 aaPredicted RBP14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 RPS9P46781 194 aaKnown RBP14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 SEC13P55735 322 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 TBX4P57082 545 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 NOMO3P69849 1222 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 AMPD2Q01433 879 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 SLC6A3Q01959 620 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 GAD2Q05329 585 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 KDSRQ06136 332 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 EMC10Q5UCC4 262 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 E4F1Q66K89 784 aaPredicted RBP14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 MSANTD2Q6P1R3 559 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 OLFML1Q6UWY5 402 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 IRF2BP2Q7Z5L9 587 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 TAC4Q86UU9 113 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 ERICH1Q86X53 443 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 KIAA1958Q8N8K9 716 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 OTUB2Q96DC9 234 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 NOX5Q96PH1 765 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 CHRDQ9H2X0 955 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 ZDHHC4Q9NPG8 344 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 COX16Q9P0S2 106 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 CLEC4EQ9ULY5 219 aa14.42□□□□□ -0.1
TSPAN3-205ENST00000558745 A0A1W2PQC6 194 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 LRRC53A6NM62 1247 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 GOLGA8SH3BPF8 625 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 K7EQS6 105 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 RNF40O75150 1001 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 CYP1A1P04798 512 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 PBX1P40424 430 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 SATB1Q01826 763 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 CSTF1Q05048 431 aaKnown RBP14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 DCAF6Q58WW2 860 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 DGKKQ5KSL6 1271 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 SMYD5Q6GMV2 418 aa14.41□□□□□ -0.1
TSPAN3-205ENST00000558745 C1orf228Q6PIY5 440 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms