RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CCR1P32246 355 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 HTR7P34969 479 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 CTNNA1P35221 906 aaKnown RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 COPS2P61201 443 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 USP46P62068 366 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 ATP11AP98196 1134 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 RING1Q06587 406 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 KCNC3Q14003 757 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 PPP2R5DQ14738 602 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 TAF5Q15542 800 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 NUGGCQ68CJ6 796 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 BHLHA9Q7RTU4 235 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 SCD5Q86SK9 330 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 RCOR2Q8IZ40 523 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 HES6Q96HZ4 224 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 DDX50Q9BQ39 737 aaKnown RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 CORO1BQ9BR76 489 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 DCLK3Q9C098 648 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 CARD9Q9H257 536 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 WDCPQ9H6R7 721 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.92□□□□□ -0.34
TPM1-209ENST00000558072 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 USP18Q9UMW8 372 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 NAALADL1Q9UQQ1 740 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 USTQ9Y2C2 406 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 HYOU1Q9Y4L1 999 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 SAR1BQ9Y6B6 198 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 OBSL1O75147 1896 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 TRAV19A0A0A6YYK7 116 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 A0A0U1RQJ8 604 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 MDM4O15151 490 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 LRCH4O75427 683 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
TPM1-209ENST00000558072 GJB6O95452 261 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 PGFP49763 221 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 ADAM15Q13444 863 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 PDK2Q15119 407 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 TRIP4Q15650 581 aaPredicted RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 CDO1Q16878 200 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 RARS2Q5T160 578 aaKnown RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 ERMARDQ5T6L9 678 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 SCYL2Q6P3W7 929 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 TMC5Q6UXY8 1006 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 KATNAL2Q8IYT4 538 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 KIAA1958Q8N8K9 716 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 ATP6V0D2Q8N8Y2 350 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 ATRIPQ8WXE1 791 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 EDEM1Q92611 657 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 PLD4Q96BZ4 506 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 RIPOR3Q96MK2 946 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 IRX2Q9BZI1 471 aaPredicted RBP12.91□□□□□ -0.34
TPM1-209ENST00000558072 ATXN3LQ9H3M9 355 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 CLDND1Q9NY35 253 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 ZNF510Q9Y2H8 683 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
TPM1-209ENST00000558072 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 IRAK2O43187 625 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 LATS1O95835 1130 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 FTCDO95954 541 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 FYNP06241 537 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 RHOP08100 348 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 MYL4P12829 197 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 GJA1P17302 382 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 HDCP19113 662 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 WEE1P30291 646 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 MIPP30301 263 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 PAFAH1B1P43034 410 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 HARS2P49590 506 aaKnown RBP12.9□□□□□ -0.34
TPM1-209ENST00000558072 CXCR3P49682 368 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 TBX4P57082 545 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 OGDHQ02218 1023 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 SCAPQ12770 1279 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 NME3Q13232 169 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 ATAT1Q5SQI0 421 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 SEL1L2Q5TEA6 688 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 ANKRD54Q6NXT1 300 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 BNIPLQ7Z465 357 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 CD101Q93033 1021 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms