RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TRIM65Q6PJ69 517 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 GBP6Q6ZN66 633 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 NUP93Q8N1F7 819 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 ANKRD20A12PQ8NF67 263 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 CEP76Q8TAP6 659 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 SLC2A14Q8TDB8 520 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 HMGB4Q8WW32 186 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 RLN3Q8WXF3 142 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 TATDN2Q93075 761 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 SMARCD1Q96GM5 515 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 FAM124BQ9H5Z6 455 aaPredicted RBP17.51■□□□□ 0.39
NEK9-211ENST00000557673 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
NEK9-211ENST00000557673 FAM49BQ9NUQ9 324 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
NEK9-211ENST00000557673 MYO16Q9Y6X6 1858 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 TBC1D3BA6NDS4 549 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 LGALS16A8MUM7 142 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 AP5Z1O43299 807 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 AP1G2O75843 785 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 TPM2P07951 284 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 CD58P19256 250 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 TBXAS1P24557 533 aaPredicted RBP17.5■□□□□ 0.39
NEK9-211ENST00000557673 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
NEK9-211ENST00000557673 KIR2DL1P43626 348 aaPredicted RBP17.5■□□□□ 0.39
NEK9-211ENST00000557673 COPB1P53618 953 aaKnown RBP17.5■□□□□ 0.39
NEK9-211ENST00000557673 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
NEK9-211ENST00000557673 LRMPQ12912 555 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 EXOC3L4Q17RC7 722 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 LYSMD4Q5XG99 296 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 SLC23A3Q6PIS1 610 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 SLC36A4Q6YBV0 504 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 RABEPKQ7Z6M1 372 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 UNC93AQ86WB7 457 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 ARHGEF19Q8IW93 802 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 TMEFF1Q8IYR6 380 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 CRYBG2Q8N1P7 616 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 UBR7Q8N806 425 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 EHBP1Q8NDI1 1231 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 DEFB124Q8NES8 71 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 SCNM1Q9BWG6 230 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 VPS16Q9H269 839 aa17.5■□□□□ 0.39
NEK9-211ENST00000557673 TCRBV21S2A2A0A5A6 115 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 UPK3BL1B0FP48 263 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 UPK3BL2E5RIL1 263 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 PES1O00541 588 aaKnown RBP17.49■□□□□ 0.39
NEK9-211ENST00000557673 CILPO75339 1184 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 HNRNPLP14866 589 aaKnown RBP eCLIP17.49■□□□□ 0.39
NEK9-211ENST00000557673 MAPK8P45983 427 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 GCNT1Q02742 428 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 KDSRQ06136 332 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 LY6G5CQ5SRR4 150 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 HECTD3Q5T447 861 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 ARMCX6Q7L4S7 300 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 PPM1KQ8N3J5 372 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 ZMIZ2Q8NF64 920 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 SCAMP5Q8TAC9 235 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 FBXO32Q969P5 355 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 SMOQ99835 787 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 DEC1Q9P2X7 70 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 SH3BP1Q9Y3L3 701 aa17.49■□□□□ 0.39
NEK9-211ENST00000557673 BEST1O76090 585 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 ENGP17813 658 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 SPINK2P20155 84 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 PON1P27169 355 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 ADORA2BP29275 332 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 PTGER3P43115 390 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 TUBP50607 506 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 SLC5A3P53794 718 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 GFPT1Q06210 699 aaPredicted RBP17.48■□□□□ 0.39
NEK9-211ENST00000557673 DUOXA1Q1HG43 343 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 MAP7D1Q3KQU3 841 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 EMC10Q5UCC4 262 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 C12orf40Q86WS4 652 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 KAT5Q92993 513 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 NT5C1AQ9BXI3 368 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 SIX2Q9NPC8 291 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 TMEM74BQ9NUR3 256 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 APEX2Q9UBZ4 518 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 MBD1Q9UIS9 605 aaPredicted RBP17.48■□□□□ 0.39
NEK9-211ENST00000557673 PILRBQ9UKJ0 227 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 SLC6A14Q9UN76 642 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 NEUROG3Q9Y4Z2 214 aa17.48■□□□□ 0.39
NEK9-211ENST00000557673 ANTXRLA6NF34 631 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 SCAMP3O14828 347 aaKnown RBP17.47■□□□□ 0.39
NEK9-211ENST00000557673 HOXC11O43248 304 aaPredicted RBP17.47■□□□□ 0.39
NEK9-211ENST00000557673 COCHO43405 550 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 ADAM23O75077 832 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 CFIP05156 583 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 SLC9A1P19634 815 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
NEK9-211ENST00000557673 MAP3K7CLP57077 242 aa17.47■□□□□ 0.39
NEK9-211ENST00000557673 YWHAEP62258 255 aaKnown RBP17.47■□□□□ 0.39
NEK9-211ENST00000557673 TPM4P67936 248 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms