RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 OSGEPQ9NPF4 335 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 NAALADL1Q9UQQ1 740 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 FAM50BQ9Y247 325 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 EYSQ5T1H1 3165 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 MBTPS2O43462 519 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 RNF8O76064 485 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 RDXP35241 583 aaKnown RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 CXCR3P49682 368 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 ZNF135P52742 658 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 OGDHQ02218 1023 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 SCAPQ12770 1279 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 CBX2Q14781 532 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 LRRC38Q5VT99 294 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 SYPL2Q5VXT5 272 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 VSIG1Q86XK7 387 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 CMTM8Q8IZV2 173 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 LRRC57Q8N9N7 239 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 TRIM58Q8NG06 486 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 TBCBQ99426 244 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 CCSER2Q9H7U1 834 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 MARCH2Q9P0N8 246 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
FOXN3-212ENST00000556541 USP15Q9Y4E8 981 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-212ENST00000556541 C2orf78A6NCI8 922 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 GRAP2O75791 330 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 TUBB4AP04350 444 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 CEBPBP17676 345 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 HDCP19113 662 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 PSMA2P25787 234 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 SULT1E1P49888 294 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 HDAC4P56524 1084 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 USP4Q13107 963 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 TEAD2Q15562 447 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 SMAD2Q15796 467 aaKnown RBP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 GPR158Q5T848 1215 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 OTOP3Q7RTS5 596 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 TAC4Q86UU9 113 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 UNC45BQ8IWX7 931 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 EMC1Q8N766 993 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 ITFG1Q8TB96 612 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 EDEM1Q92611 657 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 FGF13Q92913 245 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 TCEAL4Q96EI5 215 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 CFAP57Q96MR6 1250 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 SLC46A2Q9BY10 475 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 ARHGEF38Q9NXL2 777 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
FOXN3-212ENST00000556541 STOML2Q9UJZ1 356 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 ZNF510Q9Y2H8 683 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 DUSP10Q9Y6W6 482 aa11.73□□□□□ -0.53
FOXN3-212ENST00000556541 REV3LO60673 3130 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 MIF4GDA9UHW6 222 aaKnown RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 ZNF487B1APH4 448 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 M0QYT0 321 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 MDM4O15151 490 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 PSTPIP1O43586 416 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 LRCH4O75427 683 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 GJB6O95452 261 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 CCR1P32246 355 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 HTR7P34969 479 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 AVPR1AP37288 418 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 NOP2P46087 812 aaKnown RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 RNASE9P60153 205 aaKnown RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 NTHL1P78549 312 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 CYP4F8P98187 520 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 TXNDC8Q6A555 127 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 HTR3DQ70Z44 454 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 MAB21L3Q8N8X9 362 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 FAM172AQ8WUF8 416 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 SMARCD2Q92925 531 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 CD101Q93033 1021 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 NXPE3Q969Y0 559 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
FOXN3-212ENST00000556541 FCRL2Q96LA5 508 aaPredicted RBP11.72□□□□□ -0.53
FOXN3-212ENST00000556541 C1orf74Q96LT6 269 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms