RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SPSB3Q6PJ21 355 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 ZDHHC24Q6UX98 284 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 TRILQ7L0X0 811 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 ZBTB46Q86UZ6 589 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 DIS3LQ8TF46 1054 aaKnown RBP3.72□□□□□ -1.81
SRP54-207ENST00000555535 KBTBD7Q8WVZ9 684 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 EDC3Q96F86 508 aaKnown RBP3.72□□□□□ -1.81
SRP54-207ENST00000555535 NUP88Q99567 741 aaPredicted RBP3.72□□□□□ -1.81
SRP54-207ENST00000555535 TM2D2Q9BX73 214 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 VN1R3Q9BXE9 311 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 DPH1Q9BZG8 443 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 SPATA31A1Q5TZJ5 1347 aa3.71□□□□□ -1.81
SRP54-207ENST00000555535 RPS10-NUDT3A0A1W2PQS6 291 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 AP1G1O43747 822 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 ATG13O75143 517 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 KITP10721 976 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 RPS6KB1P23443 525 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 HTR1BP28222 390 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 RFX2P48378 723 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 ANO6Q4KMQ2 910 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 DBF4BQ8NFT6 615 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 PPP1R35Q8TAP8 253 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 DNAJB14Q8TBM8 379 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 MSI2Q96DH6 328 aaKnown RBP3.71□□□□□ -1.82
SRP54-207ENST00000555535 FCRL5Q96RD9 977 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 PIMREGQ9BSJ6 248 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 GATA5Q9BWX5 397 aaPredicted RBP3.71□□□□□ -1.82
SRP54-207ENST00000555535 ZMAT3Q9HA38 289 aaKnown RBP3.71□□□□□ -1.82
SRP54-207ENST00000555535 CNNM1Q9NRU3 951 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 NCKIPSDQ9NZQ3 722 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 ANKRD6Q9Y2G4 727 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 COL4A3BPQ9Y5P4 624 aa3.71□□□□□ -1.82
SRP54-207ENST00000555535 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 SMTNL1A8MU46 457 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 OFD1O75665 1012 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 UBXN7O94888 489 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 GM2AP17900 193 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 TFEBP19484 476 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 UQCRC1P31930 480 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 NEK2P51955 445 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 KPNB1Q14974 876 aaKnown RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 DLGAP5Q15398 846 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 INO80DQ53TQ3 878 aaPredicted RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 IFIT1BQ5T764 474 aaKnown RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 ZNF783Q6ZMS7 281 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 MPP5Q8N3R9 675 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 MAML1Q92585 1016 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 HOOK2Q96ED9 719 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 P2RY11Q96G91 374 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 WDYHV1Q96HA8 205 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 KAZALD1Q96I82 304 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 ZBTB45Q96K62 511 aaPredicted RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 INPP4AQ96PE3 977 aaPredicted RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 TRIM5Q9C035 493 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 ATP6V0A4Q9HBG4 840 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 HOMER2Q9NSB8 354 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 FZD4Q9ULV1 537 aa3.7□□□□□ -1.82
SRP54-207ENST00000555535 COL2A1P02458 1487 aaPredicted RBP3.7□□□□□ -1.82
SRP54-207ENST00000555535 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.69□□□□□ -1.82
SRP54-207ENST00000555535 ANTXRLA6NF34 631 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 H3BML4 177 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 FYB1O15117 783 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 KRT36O76013 467 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 VCAM1P19320 739 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 TIRAPP58753 221 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 TROAPQ12815 778 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 SLC13A2Q13183 592 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 B3GNT9Q6UX72 402 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 DAAM2Q86T65 1068 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 DENND1CQ8IV53 801 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 PNPLA1Q8N8W4 532 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 OR6B3Q8NGW1 331 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 PIGKQ92643 395 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 XPNPEP3Q9NQH7 507 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 AASDHPPTQ9NRN7 309 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 THSD1Q9NS62 852 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 ASAP1Q9ULH1 1129 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 SIRT4Q9Y6E7 314 aaPredicted RBP3.69□□□□□ -1.82
SRP54-207ENST00000555535 CDY1Q9Y6F8 540 aa3.69□□□□□ -1.82
SRP54-207ENST00000555535 A0A0G2JK05 382 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 H0YGN5 161 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 AGPSO00116 658 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 HOXA7P31268 230 aaPredicted RBP3.68□□□□□ -1.82
SRP54-207ENST00000555535 ROR2Q01974 943 aaKnown RBP3.68□□□□□ -1.82
SRP54-207ENST00000555535 KIAA1755Q5JYT7 1200 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 PRAMEF19Q5SWL8 479 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 ADAM5Q6NVV9 412 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 OR56A3Q8NH54 315 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 IL31RAQ8NI17 732 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 ACO2Q99798 780 aaKnown RBP3.68□□□□□ -1.82
SRP54-207ENST00000555535 RHOBTB2Q9BYZ6 727 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 TASP1Q9H6P5 420 aa3.68□□□□□ -1.82
SRP54-207ENST00000555535 A0A1W2PPL8 197 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 SLC22A23A1A5C7 686 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 A8MVJ9 347 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 RRHO14718 337 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 SRGAP2O75044 1071 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 MYBP10242 640 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 HGFP14210 728 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms