RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TOGARAM2Q6ZUX3 1019 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 BHLHA9Q7RTU4 235 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 WBP2Q969T9 261 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 SERPINB11Q96P15 392 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
SRP54-206ENST00000555317 PNKPQ96T60 521 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 BBS2Q9BXC9 721 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 SFMBT1Q9UHJ3 866 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 FBXO4Q9UKT5 387 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 HOXC11O43248 304 aaPredicted RBP12.63□□□□□ -0.39
SRP54-206ENST00000555317 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
SRP54-206ENST00000555317 RNF40O75150 1001 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 LSM8O95777 96 aaKnown RBP12.63□□□□□ -0.39
SRP54-206ENST00000555317 EGFP01133 1207 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 CCDC172P0C7W6 258 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
SRP54-206ENST00000555317 CXCL12P48061 93 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 RPL34P49207 117 aaKnown RBP12.63□□□□□ -0.39
SRP54-206ENST00000555317 KDSRQ06136 332 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 FZD5Q13467 585 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 NUGGCQ68CJ6 796 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 Q6ZNB5 142 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 Q6ZS52 159 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 LUZP1Q86V48 1076 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 DENND1CQ8IV53 801 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 ACDQ96AP0 544 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 FAM86C1Q9NVL1 165 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 DEC1Q9P2X7 70 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
SRP54-206ENST00000555317 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 EPHB6O15197 1021 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 HSF2BPO75031 334 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 GABBR2O75899 941 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 TYRP14679 529 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 OPRD1P41143 372 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 GRIA2P42262 883 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 SLC11A2P49281 568 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 NRLP54845 237 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 SEC13P55735 322 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 TBX4P57082 545 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 JAM2P57087 298 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 ARID5AQ03989 594 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 IQCB1Q15051 598 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 TRIP4Q15650 581 aaPredicted RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 ZNF528Q3MIS6 628 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 NAIF1Q69YI7 327 aaPredicted RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 NOP9Q86U38 636 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 ZDHHC17Q8IUH5 632 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 NAT16Q8N8M0 369 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 EPS8L1Q8TE68 723 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 BHMTQ93088 406 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 PRMT8Q9NR22 394 aaPredicted RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 AGO1Q9UL18 857 aaKnown RBP12.62□□□□□ -0.39
SRP54-206ENST00000555317 SLC8A2Q9UPR5 921 aa12.62□□□□□ -0.39
SRP54-206ENST00000555317 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 TYW5A2RUC4 315 aaKnown RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 GREM1O60565 184 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 KAT7O95251 611 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 LATS1O95835 1130 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 APOEP02649 317 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 TPM3P06753 285 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 GLI1P08151 1106 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 MMEP08473 750 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 SP9P0CG40 484 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 GBP1P32455 592 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 SLC6A11P48066 632 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 ZNF445P59923 1031 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 CDK17Q00537 523 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 CDR2Q01850 454 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 NNTQ13423 1086 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 DCAF6Q58WW2 860 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 FAM183BPQ6ZVS7 135 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 BEND5Q7L4P6 421 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms