RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 VAMP7P51809 220 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 KIF11P52732 1056 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 STARD3Q14849 445 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 PLEKHG6Q3KR16 790 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 WDR45BQ5MNZ6 344 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 C1orf220Q5T0J3 134 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
RDH11-207ENST00000554731 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
RDH11-207ENST00000554731 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 DNAAF2Q9NVR5 837 aaKnown RBP13.13□□□□□ -0.31
RDH11-207ENST00000554731 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 KLK13Q9UKR3 277 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 ZNF510Q9Y2H8 683 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
RDH11-207ENST00000554731 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
RDH11-207ENST00000554731 WASH3PC4AMC7 463 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 NPC1O15118 1278 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 MAPK13O15264 365 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 STC2O76061 302 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 KIF20AO95235 890 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 MYL1P05976 194 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 HSP90AA1P07900 732 aaKnown RBP13.12□□□□□ -0.31
RDH11-207ENST00000554731 CD59P13987 128 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 FAM193AP78312 1265 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 COG7P83436 770 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 ZNF423Q2M1K9 1284 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
RDH11-207ENST00000554731 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 RCOR1Q9UKL0 485 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 STON1Q9Y6Q2 735 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 PCDH15Q96QU1 1955 aa13.12□□□□□ -0.31
RDH11-207ENST00000554731 ADAMTS9Q9P2N4 1935 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 MEI4A8MW99 385 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 CILPO75339 1184 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 PENKP01210 267 aaPredicted RBP13.11□□□□□ -0.31
RDH11-207ENST00000554731 KRT13P13646 458 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 CD58P19256 250 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 NR2F2P24468 414 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 CD6P30203 668 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 CHKAP35790 457 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 GCLMP48507 274 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 ZNF132P52740 706 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 DNM1Q05193 864 aaKnown RBP13.11□□□□□ -0.31
RDH11-207ENST00000554731 FUT11Q495W5 492 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
RDH11-207ENST00000554731 METTL3Q86U44 580 aaKnown RBP13.11□□□□□ -0.31
RDH11-207ENST00000554731 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 UCMAQ8WVF2 138 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 SNX21Q969T3 373 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
RDH11-207ENST00000554731 PRDM16Q9HAZ2 1276 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
RDH11-207ENST00000554731 SH3BP5O60239 455 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 GJB3O75712 270 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 KLKB1P03952 638 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 HMBSP08397 361 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 PFKFB1P16118 471 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 MAOBP27338 520 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 CORO1AP31146 461 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 MFAP3P55082 362 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 E2F5Q15329 346 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 TRIP6Q15654 476 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 RAB44Q7Z6P3 723 aaPredicted RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 MKRN2Q9H000 416 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 USP36Q9P275 1121 aaKnown RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
RDH11-207ENST00000554731 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 USP3Q9Y6I4 520 aa13.1□□□□□ -0.31
RDH11-207ENST00000554731 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 A0A1B0GTW7 788 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms