RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-204ENST00000554116 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 MKRN2Q9H000 416 aaKnown RBP12.2□□□□□ -0.46
TUBB3-204ENST00000554116 KRT82Q9NSB4 513 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 EXOC1Q9NV70 894 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 COMMD8Q9NX08 183 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 SLCO1B1Q9Y6L6 691 aa12.2□□□□□ -0.46
TUBB3-204ENST00000554116 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 UBE4BO95155 1302 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 CYP26A1O43174 497 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 MYL1P05976 194 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 NDST1P52848 882 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 SNRPFP62306 86 aaKnown RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 GRIK2Q13002 908 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 STK4Q13043 487 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 TRPC3Q13507 836 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 NCOA4Q13772 614 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 TRIP6Q15654 476 aaKnown RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 KNOP1Q1ED39 458 aaKnown RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 FUT11Q495W5 492 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 CCNI2Q6ZMN8 369 aaPredicted RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 TPGS1Q6ZTW0 290 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 CLEC20AQ6ZU45 233 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 RABEPKQ7Z6M1 372 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 CHPFQ8IZ52 775 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 MED10Q9BTT4 135 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 BBS2Q9BXC9 721 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 TOR4AQ9NXH8 423 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 WSB2Q9NYS7 404 aaPredicted RBP12.19□□□□□ -0.46
TUBB3-204ENST00000554116 PLK2Q9NYY3 685 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 CLEC4EQ9ULY5 219 aa12.19□□□□□ -0.46
TUBB3-204ENST00000554116 KNTC1P50748 2209 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 ZNF217O75362 1048 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 DKK1O94907 266 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 RPN1P04843 607 aaKnown RBP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 ASPAP45381 313 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 SLC14A1Q13336 389 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 GEN1Q17RS7 908 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 PLEKHG6Q3KR16 790 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 C19orf48Q6RUI8 117 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 DBX2Q6ZNG2 339 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 BAHD1Q8TBE0 780 aaPredicted RBP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 BHMTQ93088 406 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 GOLPH3LQ9H4A5 285 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 USP36Q9P275 1121 aaKnown RBP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 CGNQ9P2M7 1197 aaKnown RBP12.18□□□□□ -0.46
TUBB3-204ENST00000554116 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
TUBB3-204ENST00000554116 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 GFRA2O00451 464 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 STC2O76061 302 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 ZNF202O95125 648 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 ASS1P00966 412 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 PENKP01210 267 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 SYPP08247 313 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 IL12RB1P42701 662 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 DGKGP49619 791 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 COPAP53621 1224 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 ZACNQ401N2 412 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 TMEM215Q68D42 235 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 GLRX5Q86SX6 157 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 MARCH9Q86YJ5 346 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 NAXDQ8IW45 347 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 KIAA0895Q8NCT3 520 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 TMEM174Q8WUU8 243 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 CCDC86Q9H6F5 360 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 APOBEC3GQ9HC16 384 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 ITM2CQ9NQX7 267 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
TUBB3-204ENST00000554116 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 SLC27A6Q9Y2P4 619 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 STON1Q9Y6Q2 735 aa12.17□□□□□ -0.46
TUBB3-204ENST00000554116 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms