RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ADAM32Q8TC27 787 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 HSPH1Q92598 858 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 CASP10Q92851 521 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 CDK5RAP1Q96SZ6 601 aaKnown RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 TLE6Q9H808 572 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 WDR6Q9NNW5 1121 aaKnown RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 MAN1C1Q9NR34 630 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 PIGVQ9NUD9 493 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEK9-202ENST00000553823 TRPM5Q9NZQ8 1165 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 COX16Q9P0S2 106 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 DPP7Q9UHL4 492 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 NUDT5Q9UKK9 219 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 TTC7AQ9ULT0 858 aaPredicted RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 LAMA3Q16787 3333 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 TRANK1O15050 2925 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 ZNF840PA6NDX5 716 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 PGRMC1O00264 195 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 PDE2AO00408 941 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 MDM4O15151 490 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 IRAK2O43187 625 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 HOXA9P31269 272 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 CXCR3P49682 368 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 COPS2P61201 443 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 EIF4EBP2Q13542 120 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 CLUL1Q15846 466 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 C10orf120Q5SQS8 335 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 ERMARDQ5T6L9 678 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 AADACL2Q6P093 401 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 CCDC50Q8IVM0 306 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 KCTD6Q8NC69 237 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 RAPGEF5Q92565 580 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 NTAN1Q96AB6 310 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 ACSF2Q96CM8 615 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 MRPL38Q96DV4 380 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 SERPINB11Q96P15 392 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 NAP1L3Q99457 506 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 SNRNP25Q9BV90 132 aaKnown RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 CARD6Q9BX69 1037 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 ZNF334Q9HCZ1 680 aaPredicted RBP12.23□□□□□ -0.45
NEK9-202ENST00000553823 SMARCAL1Q9NZC9 954 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
NEK9-202ENST00000553823 NOTCH4Q99466 2003 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 CTAGE15A4D2H0 777 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 RFXAPO00287 272 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 CCL16O15467 120 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 TLR5O60602 858 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 TADA3O75528 432 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 FGGP02679 453 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 HNRNPA1P09651 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK9-202ENST00000553823 CTAGE8P0CG41 777 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 KDELR1P24390 212 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 ADRA1BP35368 520 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 TUBP50607 506 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 AIF1P55008 147 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
NEK9-202ENST00000553823 EFEMP1Q12805 493 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 NNTQ13423 1086 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 KRT81Q14533 505 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 PDK2Q15119 407 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 DUSP6Q16828 381 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 LONRF2Q1L5Z9 754 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 HECTD3Q5T447 861 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 MFSD7Q6UXD7 560 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 SPOCD1Q6ZMY3 1216 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
NEK9-202ENST00000553823 CTAGE6Q86UF2 777 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 CTAGE4Q8IX94 777 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 CCDC185Q8N715 623 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 RNF34Q969K3 372 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 OSBPL8Q9BZF1 889 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK9-202ENST00000553823 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 MARCH2Q9P0N8 246 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 AP4E1Q9UPM8 1137 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 HCFC2Q9Y5Z7 792 aa12.22□□□□□ -0.45
NEK9-202ENST00000553823 A0A1W2PPC1 479 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 MSI1O43347 362 aaKnown RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 XYLBO75191 536 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms