RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ASB16Q96NS5 453 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 SLC22A12Q96S37 553 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 CYP2S1Q96SQ9 504 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 TDP1Q9NUW8 608 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 OBP2AQ9NY56 170 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 IP6K2Q9UHH9 426 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 TLR6Q9Y2C9 796 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 PAXBP1Q9Y5B6 917 aa20.17■□□□□ 0.82
PSEN1-207ENST00000553599 ZSCAN12O43309 604 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 KRT86O43790 486 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 ENDOD1O94919 500 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 GJB6O95452 261 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 TBX18O95935 607 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 SLC2A3P11169 496 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 PIGHQ14442 188 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 TRIP4Q15650 581 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 IFI16Q16666 785 aaKnown RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 CCDC14Q49A88 953 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 TRNP1Q6NT89 227 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 SND1Q7KZF4 910 aaKnown RBP eCLIP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 BNIPLQ7Z465 357 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 TAC4Q86UU9 113 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 ARID3BQ8IVW6 561 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 PLCD3Q8N3E9 789 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 CENPIQ92674 756 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 PLD4Q96BZ4 506 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 ZSWIM3Q96MP5 696 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 CFAP57Q96MR6 1250 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 MYADMQ96S97 322 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 KLF16Q9BXK1 252 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-207ENST00000553599 FAM204AQ9H8W3 233 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 RASAL2Q9UJF2 1139 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 ANAPC7Q9UJX3 599 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 NUDT5Q9UKK9 219 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 PPP2R2CQ9Y2T4 447 aa20.16■□□□□ 0.82
PSEN1-207ENST00000553599 RCCD1A6NED2 376 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 M0QYT0 321 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 IRAK2O43187 625 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 SULT1E1P49888 294 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 EIF4EBP2Q13542 120 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-207ENST00000553599 MTSS1LQ765P7 747 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 MIB1Q86YT6 1006 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
PSEN1-207ENST00000553599 NIPA2Q8N8Q9 360 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 TDRD5Q8NAT2 981 aaKnown RBP20.15■□□□□ 0.82
PSEN1-207ENST00000553599 ATXN2LQ8WWM7 1075 aaKnown RBP20.15■□□□□ 0.82
PSEN1-207ENST00000553599 LACRTQ9GZZ8 138 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 DDIT4Q9NX09 232 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 PRKAG3Q9UGI9 489 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 SFMBT1Q9UHJ3 866 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 CPQQ9Y646 472 aa20.15■□□□□ 0.82
PSEN1-207ENST00000553599 NUP210Q8TEM1 1887 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-207ENST00000553599 SLC12A8A0AV02 714 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 CCP110O43303 1012 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 RNF8O76064 485 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 PSMA2P25787 234 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 RDXP35241 583 aaKnown RBP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 NOP2P46087 812 aaKnown RBP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 TFF2Q03403 129 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 FAM78AQ5JUQ0 283 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 NUGGCQ68CJ6 796 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 UNC45BQ8IWX7 931 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 RNF10Q8N5U6 811 aaKnown RBP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 USP13Q92995 863 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 NXPE3Q969Y0 559 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 ZFRQ96KR1 1074 aaKnown RBP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 TBCBQ99426 244 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 DCLK3Q9C098 648 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 OSGEPQ9NPF4 335 aa20.14■□□□□ 0.81
PSEN1-207ENST00000553599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.14■□□□□ 0.81
PSEN1-207ENST00000553599 MDM4O15151 490 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 PROSCO94903 275 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 IGLV3-27P01718 113 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 CCR1P32246 355 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 MAN1A1P33908 653 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 CXCR3P49682 368 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 TBX4P57082 545 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 OGDHQ02218 1023 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 DEUP1Q05D60 604 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 PPP2R5DQ14738 602 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 BRMS1LQ5PSV4 323 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 ACBD5Q5T8D3 534 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-207ENST00000553599 POTEHQ6S545 545 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 ZDHHC14Q8IZN3 488 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 FAM172AQ8WUF8 416 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 SLC39A13Q96H72 371 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 ZFP14Q9HCL3 533 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 PRDM6Q9NQX0 595 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 LSM7Q9UK45 103 aaKnown RBP20.13■□□□□ 0.81
PSEN1-207ENST00000553599 ZNF510Q9Y2H8 683 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.13■□□□□ 0.81
PSEN1-207ENST00000553599 DOCK8Q8NF50 2099 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 EYSQ5T1H1 3165 aa20.13■□□□□ 0.81
PSEN1-207ENST00000553599 HELZP42694 1942 aaKnown RBP20.12■□□□□ 0.81
PSEN1-207ENST00000553599 E2F8A0AVK6 867 aa20.12■□□□□ 0.81
PSEN1-207ENST00000553599 LEFTY2O00292 366 aa20.12■□□□□ 0.81
PSEN1-207ENST00000553599 ECI2O75521 394 aa20.12■□□□□ 0.81
PSEN1-207ENST00000553599 PRAMEF12O95522 483 aa20.12■□□□□ 0.81
PSEN1-207ENST00000553599 LATS1O95835 1130 aa20.12■□□□□ 0.81
PSEN1-207ENST00000553599 PCK1P35558 622 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms