RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MROH6A6NGR9 719 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 F5H697 171 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 TRIAP1O43715 76 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ERN1O75460 977 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 CCNDBP1O95273 360 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 INHBBP09529 407 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 DRD1P21728 446 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ADORA2AP29274 412 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 PCP4P48539 62 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 HARS2P49590 506 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 RPS3AP61247 264 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 RBM6P78332 1123 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ZBED6P86452 979 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 MC1RQ01726 317 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ROR1Q01973 937 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 DCTN2Q13561 401 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ANKRD40Q6AI12 368 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ELOA2Q8IYF1 753 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 OR4N4Q8N0Y3 316 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ABRAQ8N0Z2 381 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 CCDC191Q8NCU4 936 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ZNF483Q8TF39 744 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 NOC3LQ8WTT2 800 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 OSCP1Q8WVF1 389 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 TBC1D5Q92609 795 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 CALML4Q96GE6 196 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 TMEM176AQ96HP8 235 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 RADILQ96JH8 1075 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 FEM1CQ96JP0 617 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 FAR2Q96K12 515 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 PHF7Q9BWX1 381 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 TXLNGYQ9BZA5 131 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 SYNPO2LQ9H987 977 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ZCCHC17Q9NP64 241 aaKnown RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 HSFX1Q9UBD0 423 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 NKX1-2Q9UD57 310 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-208ENST00000553278 GIMAP2Q9UG22 337 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 RPS6KA6Q9UK32 745 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 ENTPD2Q9Y5L3 495 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 SNX14Q9Y5W7 946 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 LYVE1Q9Y5Y7 322 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 TBC1D3DA0A087WVF3 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3IA0A087WXS9 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3EA0A087X179 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3KA0A087X1G2 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3BA6NDS4 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3FA6NER0 549 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3LB9A6J9 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 HEXIM1O94992 359 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 APOA4P06727 396 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3HP0C7X1 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TMEM225BP0DP42 221 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 CHN1P15882 459 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 GLDCP23378 1020 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 RPS19P39019 145 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 PBX1P40424 430 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 ARL1P40616 181 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 DGKQP52824 942 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TIRAPP58753 221 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 MC2RQ01718 297 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 GOLGA8FQ08AF8 430 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 PTP4A2Q12974 167 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 BECN1Q14457 450 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 GRM7Q14831 915 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 PLCB4Q15147 1175 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 ELAVL1Q15717 326 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 LRRC24Q50LG9 513 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 RBM20Q5T481 1227 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 DEPDC1Q5TB30 811 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3GQ6DHY5 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3CQ6IPX1 549 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TMPRSS9Q7Z410 1059 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 SYT12Q8IV01 421 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TBC1D3Q8IZP1 549 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 TTC39CQ8N584 583 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 ZNF366Q8N895 744 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 LSM14AQ8ND56 463 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 FAM120BQ96EK7 910 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 HAPLN3Q96S86 360 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 YME1L1Q96TA2 773 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 CD180Q99467 661 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 C17orf80Q9BSJ5 609 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 RANBP17Q9H2T7 1088 aaKnown RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 NRDE2Q9H7Z3 1164 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 ALKBH4Q9NXW9 302 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 RNF181Q9P0P0 153 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 SERTAD3Q9UJW9 196 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 ZNF215Q9UL58 517 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-208ENST00000553278 SSX2IPQ9Y2D8 614 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
SCFD1-208ENST00000553278 PASKQ96RG2 1323 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 RUSC2Q8N2Y8 1516 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 A0A1B0GTW7 788 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TMEM232C9JQI7 657 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 PTGES3LE9PB15 166 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms