RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 GOLGA6L7A0A1B0GV03 622 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 H0Y858 1186 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 GFRA2O00451 464 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 RALAP11233 206 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 RFX1P22670 979 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 CORO1AP31146 461 aaKnown RBP11.72□□□□□ -0.53
RAB5B-208ENST00000550283 KRT9P35527 623 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 PSEN1P49768 467 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 PDE6CP51160 858 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 MTAPQ13126 283 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 CCINQ13939 588 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 TRIP4Q15650 581 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-208ENST00000550283 TMEM196Q5HYL7 178 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 NAA35Q5VZE5 725 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
RAB5B-208ENST00000550283 TAC4Q86UU9 113 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-208ENST00000550283 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 NAT16Q8N8M0 369 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 ANKRD20A12PQ8NF67 263 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 ATP2A3Q93084 1043 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 BHMTQ93088 406 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 SHDQ96IW2 340 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 C8orf33Q9H7E9 229 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-208ENST00000550283 ANLNQ9NQW6 1124 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 SH3BP1Q9Y3L3 701 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 MYO15AQ9UKN7 3530 aa11.72□□□□□ -0.53
RAB5B-208ENST00000550283 MIA3Q5JRA6 1907 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 LRRC53A6NM62 1247 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 I6L893 689 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 SERPINC1P01008 464 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 IGLV3-25P01717 112 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 IGLV3-27P01718 113 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 CYP1A1P04798 512 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 TPM2P07951 284 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 NCAM1P13591 858 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 STAT1P42224 750 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 MLLT6P55198 1093 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 CDR2Q01850 454 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 KDSRQ06136 332 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 DMWDQ09019 674 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 ARTNQ5T4W7 220 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 EMC10Q5UCC4 262 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 NADSYN1Q6IA69 706 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 TPGS1Q6ZTW0 290 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 TOGARAM2Q6ZUX3 1019 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 XYLT1Q86Y38 959 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 ETFBKMTQ8IXQ9 262 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 CPA6Q8N4T0 437 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 FAM149B1Q96BN6 582 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 FCRL2Q96LA5 508 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 SLC2A13Q96QE2 648 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 XPO4Q9C0E2 1151 aaKnown RBP11.71□□□□□ -0.53
RAB5B-208ENST00000550283 ABCC13Q9NSE7 274 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 TAS2R14Q9NYV8 317 aa11.71□□□□□ -0.53
RAB5B-208ENST00000550283 A0A1W2PQC6 194 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 K7EQS6 105 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 TSPAN3O60637 253 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 FBXO21O94952 628 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 NFATC1O95644 943 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ADH5P11766 374 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 SKILP12757 684 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 UNGP13051 313 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-208ENST00000550283 TDGF1P13385 188 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 SLC6A4P31645 630 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ACADSBP45954 432 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
RAB5B-208ENST00000550283 UBASH3AP57075 661 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ZNF445P59923 1031 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 SATB1Q01826 763 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 GOLGA8FQ08AF8 430 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 GOLGA8DPQ0D2H9 430 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ANGPT1Q15389 498 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 OR6B2Q6IFH4 312 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 DDX42Q86XP3 938 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAB5B-208ENST00000550283 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 SLC39A13Q96H72 371 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 P2RY13Q9BPV8 354 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 OSBPL6Q9BZF3 934 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 CHRDQ9H2X0 955 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 SPHK2Q9NRA0 654 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 TMPRSS4Q9NRS4 437 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 KIAA1549LQ6ZVL6 1849 aa11.7□□□□□ -0.54
RAB5B-208ENST00000550283 NEDD8-MDP1E9PL57 170 aa11.69□□□□□ -0.54
RAB5B-208ENST00000550283 GOLGA8SH3BPF8 625 aa11.69□□□□□ -0.54
RAB5B-208ENST00000550283 HOXC11O43248 304 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms