RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PI15O43692 258 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 HSF2BPO75031 334 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 TPM3P06753 285 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 IRF1P10914 325 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 NCAM1P13591 858 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 CD72P21854 359 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 TARSP26639 723 aaKnown RBP19.97■□□□□ 0.79
DDX55-211ENST00000544429 GJA4P35212 333 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 KPNA1P52294 538 aaPredicted RBP19.97■□□□□ 0.79
DDX55-211ENST00000544429 VCPP55072 806 aaKnown RBP19.97■□□□□ 0.79
DDX55-211ENST00000544429 SLC6A3Q01959 620 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 CLEC16AQ2KHT3 1053 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 ERICH1Q86X53 443 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 FAM217AQ8IXS0 508 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 CCDC105Q8IYK2 499 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 TTC16Q8NEE8 873 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 TTC8Q8TAM2 541 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 DQX1Q8TE96 717 aaKnown RBP19.97■□□□□ 0.79
DDX55-211ENST00000544429 GOLGA1Q92805 767 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 CLDN23Q96B33 292 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 FAM149B1Q96BN6 582 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 PLD4Q96BZ4 506 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 C18orf8Q96DM3 657 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 RBSNQ9H1K0 784 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 SFMBT1Q9UHJ3 866 aa19.97■□□□□ 0.79
DDX55-211ENST00000544429 SLC12A8A0AV02 714 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 AVPR2P30518 371 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 GSCP56915 257 aaPredicted RBP19.96■□□□□ 0.79
DDX55-211ENST00000544429 ZBED6P86452 979 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 RING1Q06587 406 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 DHCR24Q15392 516 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 TOGARAM2Q6ZUX3 1019 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 PHF13Q86YI8 300 aaPredicted RBP19.96■□□□□ 0.79
DDX55-211ENST00000544429 FLCNQ8NFG4 579 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 FAM3CQ92520 227 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 SLC39A13Q96H72 371 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 DCLK3Q9C098 648 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 NUCKS1Q9H1E3 243 aaKnown RBP19.96■□□□□ 0.79
DDX55-211ENST00000544429 STOML2Q9UJZ1 356 aa19.96■□□□□ 0.79
DDX55-211ENST00000544429 LSM7Q9UK45 103 aaKnown RBP19.96■□□□□ 0.79
DDX55-211ENST00000544429 GFRA2O00451 464 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 TRDMT1O14717 391 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 MSI1O43347 362 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 CORO1AP31146 461 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 ASIC2Q16515 512 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 HGSNATQ68CP4 663 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 SPECC1LQ69YQ0 1117 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 OR6B2Q6IFH4 312 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 ARCQ7LC44 396 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 VSTM4Q8IW00 320 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 SUGP1Q8IWZ8 645 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 NT5C3BQ969T7 300 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 SYNCQ9H7C4 482 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 SPHK2Q9NRA0 654 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 MARK1Q9P0L2 795 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 AGO1Q9UL18 857 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 ZNF510Q9Y2H8 683 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 MRPS17Q9Y2R5 130 aaKnown RBP19.95■□□□□ 0.78
DDX55-211ENST00000544429 SIT1Q9Y3P8 196 aa19.95■□□□□ 0.78
DDX55-211ENST00000544429 HOXC11O43248 304 aaPredicted RBP19.94■□□□□ 0.78
DDX55-211ENST00000544429 DAB1O75553 588 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 LATS1O95835 1130 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 HNRNPH3P31942 346 aaKnown RBP19.94■□□□□ 0.78
DDX55-211ENST00000544429 OPRD1P41143 372 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 PITX1P78337 314 aaPredicted RBP19.94■□□□□ 0.78
DDX55-211ENST00000544429 NR1H3Q13133 447 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 CCINQ13939 588 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 C2CD6Q53TS8 623 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 TMEM196Q5HYL7 178 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 LY6G5CQ5SRR4 150 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 MON1BQ7L1V2 547 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 ZNF571Q7Z3V5 609 aaPredicted RBP19.94■□□□□ 0.78
DDX55-211ENST00000544429 TAC4Q86UU9 113 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 TMEM25Q86YD3 366 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 MSANTD4Q8NCY6 345 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 SLC30A5Q8TAD4 765 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 P2RY11Q96G91 374 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 FCRL2Q96LA5 508 aaPredicted RBP19.94■□□□□ 0.78
DDX55-211ENST00000544429 HAUS4Q9H6D7 363 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 TMEM59LQ9UK28 342 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 TLR6Q9Y2C9 796 aa19.94■□□□□ 0.78
DDX55-211ENST00000544429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDX55-211ENST00000544429 FAM170BA6NMN3 283 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 IRAK2O43187 625 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 ADH1CP00326 375 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 HMBSP08397 361 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 CHRNB1P11230 501 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 RPS9P46781 194 aaKnown RBP19.93■□□□□ 0.78
DDX55-211ENST00000544429 AMPD2Q01433 879 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 DCAF6Q58WW2 860 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 OTUD1Q5VV17 481 aaPredicted RBP19.93■□□□□ 0.78
DDX55-211ENST00000544429 NAIF1Q69YI7 327 aaPredicted RBP19.93■□□□□ 0.78
DDX55-211ENST00000544429 MMS22LQ6ZRQ5 1243 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 BNIPLQ7Z465 357 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 DENND1CQ8IV53 801 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 ETFBKMTQ8IXQ9 262 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 DEFB106AQ8N104 65 aa19.93■□□□□ 0.78
DDX55-211ENST00000544429 CPXM2Q8N436 756 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms