RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 FAM228BP0C875 321 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 MATKP42679 507 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 IFNAR2P48551 515 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 RNASE9P60153 205 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 NNTQ13423 1086 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 TRIP4Q15650 581 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 PHLDB2Q86SQ0 1253 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 C3orf20Q8ND61 904 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 PLD4Q96BZ4 506 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 SERPINB11Q96P15 392 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 CHP1Q99653 195 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 GRPEL1Q9HAV7 217 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 METTL5Q9NRN9 209 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 TBC1D14Q9P2M4 693 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 WNT16Q9UBV4 365 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 WNT6Q9Y6F9 365 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 TCRBV5S1A1TA0A578 114 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 SCAMP3O14828 347 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 MSI1O43347 362 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 TRUB2O95900 331 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 IGLV3-25P01717 112 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 ASTE1Q2TB18 679 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 EML3Q32P44 896 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 TRIM68Q6AZZ1 485 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 Q6ZNB5 142 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 TAC4Q86UU9 113 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 OTUB2Q96DC9 234 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 DCLK3Q9C098 648 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 LINC00597Q9H2U6 94 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 HPS4Q9NQG7 708 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 RRN3Q9NYV6 651 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 IMPACTQ9P2X3 320 aa17.84■□□□□ 0.45
RABGGTA-203ENST00000543002 SIGLEC16A6NMB1 481 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 IRAK2O43187 625 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 KLKB1P03952 638 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 KRT3P12035 628 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 RRM1P23921 792 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 FLT3P36888 993 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 TBX4P57082 545 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 PITX1P78337 314 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 RING1Q06587 406 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 TNK2Q07912 1038 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 SIGLEC14Q08ET2 396 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 EIF4EBP2Q13542 120 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 RUNX3Q13761 415 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC18A3Q16572 532 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 DNAJC24Q6P3W2 148 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 ALKBH5Q6P6C2 394 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 DNAAF5Q86Y56 855 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 BBS7Q8IWZ6 715 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 ADAM32Q8TC27 787 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 ATP2A3Q93084 1043 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 NT5C3BQ969T7 300 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 TRIM11Q96F44 468 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 PANX2Q96RD6 677 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 NPY6RQ99463 290 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 DDX23Q9BUQ8 820 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 SELENOOQ9BVL4 669 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 DEF6Q9H4E7 631 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 EBF3Q9H4W6 596 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 NHEJ1Q9H9Q4 299 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 FBXL21Q9UKT6 434 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 STAP1Q9ULZ2 295 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 NENFQ9UMX5 172 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 TLR6Q9Y2C9 796 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 ZNF510Q9Y2H8 683 aa17.83■□□□□ 0.44
RABGGTA-203ENST00000543002 ARSAP15289 507 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 CORO1AP31146 461 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 GBP1P32455 592 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 HARS2P49590 506 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 GFPT1Q06210 699 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 ITPRIPL2Q3MIP1 535 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC44A4Q53GD3 710 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 TRNP1Q6NT89 227 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 TRIM67Q6ZTA4 783 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 ADGRG2Q8IZP9 1017 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 JOSD2Q8TAC2 188 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC39A13Q96H72 371 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 CCDC42Q96M95 316 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 FAM204AQ9H8W3 233 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 GTSE1Q9NYZ3 720 aa17.82■□□□□ 0.44
RABGGTA-203ENST00000543002 M0QYT0 321 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 AKR1B10O60218 316 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 GJB6O95452 261 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 NFATC1O95644 943 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 MYBL1P10243 752 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 MLLT6P55198 1093 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC25A52Q3SY17 297 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 IER5LQ5T953 404 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 NUGGCQ68CJ6 796 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 PLEKHA7Q6IQ23 1121 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 DENND1CQ8IV53 801 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 UNC45BQ8IWX7 931 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 CPA6Q8N4T0 437 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 EMC1Q8N766 993 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms