RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TRHDEQ9UKU6 1024 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 STX8Q9UNK0 236 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 AGTPBP1Q9UPW5 1226 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 CYP46A1Q9Y6A2 500 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 SIPA1L1O43166 1804 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 PHIPQ8WWQ0 1821 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CYP2D7A0A087X1C5 515 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CCL15-CCL14A0A0B4J2E2 113 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 IGKV6D-41A0A0C4DH26 115 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 K7ESF4 209 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 IFIT3O14879 490 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 MARCH6O60337 910 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 ERN1O75460 977 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 CYP2D6P10635 497 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 MTHFD2P13995 350 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 SMARCA1P28370 1054 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 NOVP48745 357 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 MCM2P49736 904 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 HAND2P61296 217 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 ERVK-21P61565 698 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CCNA1P78396 465 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 IRX3P78415 501 aaPredicted RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 KIF23Q02241 960 aaPredicted RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 COG2Q14746 738 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 KIF22Q14807 665 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 WTAPQ15007 396 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 SEPT2Q15019 361 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CCL15Q16663 113 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 MUM1Q2TAK8 710 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 ANO4Q32M45 955 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 IFIT1BQ5T764 474 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 BHLHA9Q7RTU4 235 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CATIPQ7Z7H3 387 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 FAM160B2Q86V87 743 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CASKIN2Q8WXE0 1202 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 DYNLL2Q96FJ2 89 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CLMNQ96JQ2 1002 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 ALDH8A1Q9H2A2 487 aaPredicted RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 DNAJC18Q9H819 358 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 VCPKMTQ9H867 229 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 IFT122Q9HBG6 1241 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 ASB6Q9NWX5 421 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 CLIP2Q9UDT6 1046 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 FEM1BQ9UK73 627 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 SCAF8Q9UPN6 1271 aaKnown RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 PTPRFP10586 1907 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 GREB1LQ9C091 1923 aaPredicted RBP5.05□□□□□ -1.6
MDM2-228ENST00000542502 THSD7BQ9C0I4 1608 aa5.05□□□□□ -1.6
MDM2-228ENST00000542502 LOC285556D6RIA3 1793 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 CCDC69A6NI79 296 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 F5H6K3 240 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 GABRDO14764 452 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 TEX33O43247 280 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 PEX1O43933 1283 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 PRDM1O75626 825 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 EEF2P13639 858 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 AKR1B1P15121 316 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 CAPN2P17655 700 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SLC1A4P43007 532 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 STAT2P52630 851 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 OAZ1P54368 228 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 HMGCS2P54868 508 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 KLRC3Q07444 240 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 PPP3CAQ08209 521 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 ASPRV1Q53RT3 343 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SYDE2Q5VT97 1194 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 CPLX2Q6PUV4 134 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 GADL1Q6ZQY3 521 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SEM1Q6ZVN7 128 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 MOB2Q70IA6 237 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 RUFY3Q7L099 469 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 CCAR1Q8IX12 1150 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 CBARPQ8N350 705 aaPredicted RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 SAMD3Q8N6K7 520 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SLC44A5Q8NCS7 719 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SMCR8Q8TEV9 937 aaPredicted RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 MARS2Q96GW9 593 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 UROC1Q96N76 676 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 MED15Q96RN5 788 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 SMAD5Q99717 465 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 SLC29A3Q9BZD2 475 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 QRSL1Q9H0R6 528 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 LDAHQ9H6V9 325 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 IL17RBQ9NRM6 502 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 RBM28Q9NW13 759 aaKnown RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 AJAP1Q9UKB5 411 aaPredicted RBP5.04□□□□□ -1.6
MDM2-228ENST00000542502 RABGAP1Q9Y3P9 1069 aa5.04□□□□□ -1.6
MDM2-228ENST00000542502 TNKSO95271 1327 aa5.03□□□□□ -1.6
MDM2-228ENST00000542502 PDHXO00330 501 aa5.03□□□□□ -1.6
MDM2-228ENST00000542502 PRC1O43663 620 aa5.03□□□□□ -1.6
MDM2-228ENST00000542502 STRNO43815 780 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms