RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 HIPK3Q9H422 1215 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 IMP3Q9NV31 184 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 CDC23Q9UJX2 597 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PDS5AQ29RF7 1337 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 PRAG1Q86YV5 1406 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 NLRP1Q9C000 1473 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TRIM43BA6NCK2 446 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PSMD9O00233 223 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 IGSF6O95976 241 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 FGBP02675 491 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 INSRRP14616 1297 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 SERPINB5P36952 375 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PNPLA4P41247 253 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ZSWIM7Q19AV6 140 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 GLT6D1Q7Z4J2 308 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TAF8Q7Z7C8 310 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 GPR135Q8IZ08 494 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 SUN3Q8TAQ9 357 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CALML6Q8TD86 181 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PPP1R16AQ96I34 528 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 FEM1CQ96JP0 617 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 ARMC7Q9H6L4 198 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 NEK6Q9HC98 313 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 LMBRD1Q9NUN5 540 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RIC8BQ9NVN3 520 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CLIC5Q9NZA1 410 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ERVK-11Q9UQG0 969 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PDX1P52945 283 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 COPZ1P61923 177 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 MAPRE2Q15555 327 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 USP41Q3LFD5 358 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 MAP4K1Q92918 833 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SLC9A7Q96T83 725 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ENTPD4Q9Y227 616 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 STK36Q9NRP7 1315 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 RHPN2P1A8MT19 583 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 PHF20L1A8MW92 1017 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 OR6B1O95007 311 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 RPL4P36578 427 aaKnown RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 ADIGQ0VDE8 80 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ABRQ12979 859 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CSHL1Q14406 222 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GPAT3Q53EU6 434 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TEDDM1Q5T9Z0 273 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TRIM72Q6ZMU5 477 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 RASSF6Q6ZTQ3 369 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CYP4Z1Q86W10 505 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 NAXEQ8NCW5 288 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SPPL2AQ8TCT8 520 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TUBB6Q9BUF5 446 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SPATC1LQ9H0A9 340 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 RNF121Q9H920 327 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SLC35C2Q9NQQ7 365 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 MRFAP1Q9Y605 127 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 NR5A2O00482 541 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 INMTO95050 263 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 PDHA2P29803 388 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TUBP50607 506 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TAP1Q03518 808 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GRIK3Q13003 919 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 LAMB3Q13751 1172 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GFOD2Q3B7J2 385 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 MRNIPQ6NTE8 343 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SLC30A10Q6XR72 485 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SLFN11Q7Z7L1 901 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 HPS6Q86YV9 775 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 LINC00301Q8NCQ3 95 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ZNF563Q8TA94 476 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 LMLNQ96KR4 655 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GAD1Q99259 594 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CBWD1Q9BRT8 395 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CARD9Q9H257 536 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 LDAHQ9H6V9 325 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 STMN3Q9NZ72 180 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ITSN2Q9NZM3 1697 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 O00370 1275 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GUCY1B2O75343 617 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 BMP10O95393 424 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 DBIP07108 87 aaKnown RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 CDH2P19022 906 aaPredicted RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 EPORP19235 508 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CYP2A7P20853 494 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ATP6V1B2P21281 511 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 GGCXP38435 758 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 POLD2P49005 469 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 NUP107P57740 925 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CXCL9Q07325 125 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 ALG11Q2TAA5 492 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 CHADLQ6NUI6 762 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 ESRP1Q6NXG1 681 aaKnown RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 C3orf62Q6ZUJ4 267 aa6.48□□□□□ -1.37
DMD-228ENST00000541735 SPATS2Q86XZ4 545 aaKnown RBP6.48□□□□□ -1.37
DMD-228ENST00000541735 CASP10Q92851 521 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms