RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RNF40O75150 1001 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 CHRM1P11229 460 aaPredicted RBP17.65■□□□□ 0.42
CD9-209ENST00000540891 HOXC13P31276 330 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 KRT9P35527 623 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 EIF2DP41214 584 aaKnown RBP17.65■□□□□ 0.42
CD9-209ENST00000540891 NBL1P41271 181 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 CSTF1Q05048 431 aaKnown RBP17.65■□□□□ 0.42
CD9-209ENST00000540891 PTPN20Q4JDL3 420 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 EPS8L1Q8TE68 723 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 PLD4Q96BZ4 506 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 PPP1R13BQ96KQ4 1090 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 CBX8Q9HC52 389 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 NAALADL1Q9UQQ1 740 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 HBS1LQ9Y450 684 aaKnown RBP17.65■□□□□ 0.42
CD9-209ENST00000540891 K7EQS6 105 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 SART1O43290 800 aaKnown RBP17.64■□□□□ 0.41
CD9-209ENST00000540891 GFPT2O94808 682 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 IGLV3-27P01718 113 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 ERBB2P04626 1255 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 CDH5P33151 784 aaPredicted RBP17.64■□□□□ 0.41
CD9-209ENST00000540891 SOX5P35711 763 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 CCR3P51677 355 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 TAF5Q15542 800 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 ANO4Q32M45 955 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 TAF3Q5VWG9 929 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 SYPL2Q5VXT5 272 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 TPGS1Q6ZTW0 290 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 BEND5Q7L4P6 421 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 DENND1CQ8IV53 801 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 FAM217AQ8IXS0 508 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 NAT16Q8N8M0 369 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 DQX1Q8TE96 717 aaKnown RBP17.64■□□□□ 0.41
CD9-209ENST00000540891 NELL1Q92832 810 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 EXOC4Q96A65 974 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 DCLK3Q9C098 648 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
CD9-209ENST00000540891 NOCTQ9UK39 431 aaKnown RBP17.64■□□□□ 0.41
CD9-209ENST00000540891 ZNF510Q9Y2H8 683 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
CD9-209ENST00000540891 A0A0A0MRY4 1105 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 K7ESF4 209 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 TRIM24O15164 1050 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 TULP3O75386 442 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 MMEP08473 750 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 NCAM1P13591 858 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 CXCL12P48061 93 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 SKOR2Q2VWA4 1001 aaPredicted RBP17.63■□□□□ 0.41
CD9-209ENST00000540891 ZNF528Q3MIS6 628 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 FBXO43Q4G163 708 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 LUZP1Q86V48 1076 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 NEK11Q8NG66 645 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 SLC20A1Q8WUM9 679 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 GOLGA1Q92805 767 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 FAM149B1Q96BN6 582 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
CD9-209ENST00000540891 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
CD9-209ENST00000540891 PNKPQ96T60 521 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 KIAA1549LQ6ZVL6 1849 aa17.63■□□□□ 0.41
CD9-209ENST00000540891 CHURC1-FNTBB4DL54 471 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 NEDD8-MDP1E9PL57 170 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 CACNG3O60359 315 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 KAT7O95251 611 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 PAPSS2O95340 614 aaPredicted RBP17.62■□□□□ 0.41
CD9-209ENST00000540891 TYRP14679 529 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 CHRNB2P17787 502 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 KDSRQ06136 332 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 FYB2Q5VWT5 728 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 OLFML1Q6UWY5 402 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 FAM183BPQ6ZVS7 135 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 TAC4Q86UU9 113 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 CPXM2Q8N436 756 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 TMEM35BQ8NCS4 154 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 RPLP0P6Q8NHW5 317 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 SPAG5Q96R06 1193 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 POPDC2Q9HBU9 364 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 ARHGEF4Q9NR80 690 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 POLR3BQ9NW08 1133 aaPredicted RBP17.62■□□□□ 0.41
CD9-209ENST00000540891 STOML2Q9UJZ1 356 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 R4GN57 208 aa17.62■□□□□ 0.41
CD9-209ENST00000540891 MYO15AQ9UKN7 3530 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 A0A1B0GTH6 734 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 FAM170AA1A519 330 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 PROB1E7EW31 1015 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 GFRA2O00451 464 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 PENKP01210 267 aaPredicted RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 IGLV3-25P01717 112 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 CHKAP35790 457 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 STAT1P42224 750 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 YWHAZP63104 245 aaKnown RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 PITX1P78337 314 aaPredicted RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 EIF4EBP2Q13542 120 aaPredicted RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 ZBTB44Q8NCP5 570 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 ADAM32Q8TC27 787 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 SLC39A13Q96H72 371 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 FCRL2Q96LA5 508 aaPredicted RBP17.61■□□□□ 0.41
CD9-209ENST00000540891 NOX5Q96PH1 765 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 SLC2A13Q96QE2 648 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms