RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 EPS8L1Q8TE68 723 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 SLC20A1Q8WUM9 679 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 NOCTQ9UK39 431 aaKnown RBP19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 AGO1Q9UL18 857 aaKnown RBP19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 NAALADL1Q9UQQ1 740 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 CACNA1HO95180 2353 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 HOXC11O43248 304 aaPredicted RBP19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 ERBB2P04626 1255 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 MMEP08473 750 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 DRD1P21728 446 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 SOX5P35711 763 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 SATB1Q01826 763 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 GAD2Q05329 585 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 ANO4Q32M45 955 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 PTPN20Q4JDL3 420 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 SYPL2Q5VXT5 272 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 TPGS1Q6ZTW0 290 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 ETFBKMTQ8IXQ9 262 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 PHTF2Q8N3S3 785 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 FAM149B1Q96BN6 582 aa19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 PRMT8Q9NR22 394 aaPredicted RBP19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 POLR3BQ9NW08 1133 aaPredicted RBP19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 HBS1LQ9Y450 684 aaKnown RBP19.11■□□□□ 0.65
SNRPA1-203ENST00000540017 ATG2BQ96BY7 2078 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 K7EQS6 105 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 TRIM24O15164 1050 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 RNF40O75150 1001 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 NCAM1P13591 858 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 CHRNB2P17787 502 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 CDH5P33151 784 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 CSTF1Q05048 431 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 FAM183BPQ6ZVS7 135 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 SYNPOQ8N3V7 929 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 SPEM1Q8N4L4 309 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 DQX1Q8TE96 717 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 GOLGA1Q92805 767 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 PLD4Q96BZ4 506 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 FAM122AQ96E09 287 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 SPAG5Q96R06 1193 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 IER2Q9BTL4 223 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 DCLK3Q9C098 648 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 DAAM1Q9Y4D1 1078 aa19.1■□□□□ 0.65
SNRPA1-203ENST00000540017 A0A1B0GTH6 734 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 NEDD8-MDP1E9PL57 170 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 SART1O43290 800 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 IGLV3-27P01718 113 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 TDGF1P13385 188 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 EIF2DP41214 584 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 STAT1P42224 750 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 KDSRQ06136 332 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 NFKBIBQ15653 356 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 TMEM35BQ8NCS4 154 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 ADAM32Q8TC27 787 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 BHMTQ93088 406 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 PNKPQ96T60 521 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 BBS2Q9BXC9 721 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 IRF2BPLQ9H1B7 796 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 PLK2Q9NYY3 685 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 MARK1Q9P0L2 795 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 FBXO4Q9UKT5 387 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 ZNF510Q9Y2H8 683 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 KIAA1549LQ6ZVL6 1849 aa19.09■□□□□ 0.65
SNRPA1-203ENST00000540017 TULP3O75386 442 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 CHRM1P11229 460 aaPredicted RBP19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 TYRP14679 529 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 CXCL12P48061 93 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 YWHAZP63104 245 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 OR6B2Q6IFH4 312 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 OLFML1Q6UWY5 402 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 BEND5Q7L4P6 421 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 TAC4Q86UU9 113 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 FAM217AQ8IXS0 508 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 NOX5Q96PH1 765 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 POPDC2Q9HBU9 364 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 CEP83Q9Y592 693 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 R4GN57 208 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 MYO15AQ9UKN7 3530 aa19.08■□□□□ 0.64
SNRPA1-203ENST00000540017 A0A0A0MRY4 1105 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 CACNG3O60359 315 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 GRAP2O75791 330 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 KAT7O95251 611 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 NBL1P41271 181 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 GABRB2P47870 512 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 HARS2P49590 506 aaKnown RBP19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 CCR3P51677 355 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 SEC13P55735 322 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 TBX4P57082 545 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 NOMO3P69849 1222 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 FMO1Q01740 532 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 CDR2Q01850 454 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 NR1I3Q14994 352 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 ZNF528Q3MIS6 628 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 FBXO43Q4G163 708 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 C2CD6Q53TS8 623 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 EMC10Q5UCC4 262 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 FYB2Q5VWT5 728 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 RPLP0P6Q8NHW5 317 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 CPA5Q8WXQ8 436 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms