RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TRUB2O95900 331 aaKnown RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 F9P00740 461 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 WEE1P30291 646 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 PTPN9P43378 593 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 SULT1E1P49888 294 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 ZNF143P52747 638 aaPredicted RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 SLC7A9P82251 487 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 COG7P83436 770 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 TCEAL1Q15170 157 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 SMAD2Q15796 467 aaKnown RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 MIB1Q86YT6 1006 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 ZSCAN18Q8TBC5 510 aaPredicted RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 CALR3Q96L12 384 aaKnown RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 ZSWIM3Q96MP5 696 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 CFAP57Q96MR6 1250 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 SLC22A12Q96S37 553 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 CNPY3Q9BT09 278 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.17
DDB1-216ENST00000539739 LACRTQ9GZZ8 138 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 THEGQ9P2T0 379 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 SFMBT1Q9UHJ3 866 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 TFR2Q9UP52 801 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 PPP2R2CQ9Y2T4 447 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 SLC12A8A0AV02 714 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 M0QYT0 321 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 DPYSL4O14531 572 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 MDM4O15151 490 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 ZSCAN12O43309 604 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 PSMA2P25787 234 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 NAP1L1P55209 391 aaKnown RBP16.08■□□□□ 0.16
DDB1-216ENST00000539739 TFF2Q03403 129 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 NNTQ13423 1086 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 CCDC14Q49A88 953 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 SND1Q7KZF4 910 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■□□□ 13.2
DDB1-216ENST00000539739 TAC4Q86UU9 113 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDB1-216ENST00000539739 ARID3BQ8IVW6 561 aaPredicted RBP16.08■□□□□ 0.16
DDB1-216ENST00000539739 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 MYADMQ96S97 322 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 NPY6RQ99463 290 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 PRDM6Q9NQX0 595 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 HBS1LQ9Y450 684 aaKnown RBP16.08■□□□□ 0.16
DDB1-216ENST00000539739 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 CPQQ9Y646 472 aa16.08■□□□□ 0.16
DDB1-216ENST00000539739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDB1-216ENST00000539739 ANAPC1Q9H1A4 1944 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 SYNJ2BP-COX16A0A087WUM0 186 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 MTA2O94776 668 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 LAMP2P13473 410 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 CBX1P83916 185 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 ATP11AP98196 1134 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 DEUP1Q05D60 604 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 PIGHQ14442 188 aaPredicted RBP16.07■□□□□ 0.16
DDB1-216ENST00000539739 ACAP1Q15027 740 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
DDB1-216ENST00000539739 CDO1Q16878 200 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 ADAM32Q8TC27 787 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 SMARCD2Q92925 531 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
DDB1-216ENST00000539739 ASB16Q96NS5 453 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 TBCBQ99426 244 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 KIF9Q9HAQ2 790 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 SMPD4Q9NXE4 827 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 COX16Q9P0S2 106 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 ARHGAP26Q9UNA1 814 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 PAXBP1Q9Y5B6 917 aa16.07■□□□□ 0.16
DDB1-216ENST00000539739 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
DDB1-216ENST00000539739 DENND4CQ5VZ89 1909 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 IRAK2O43187 625 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 RNF8O76064 485 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 ARHGAP25P42331 645 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 TBX4P57082 545 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 NME3Q13232 169 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 TRIP4Q15650 581 aaPredicted RBP16.06■□□□□ 0.16
DDB1-216ENST00000539739 C15orf59Q2T9L4 293 aaPredicted RBP16.06■□□□□ 0.16
DDB1-216ENST00000539739 ZNF662Q6ZS27 426 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 STRADAQ7RTN6 431 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
DDB1-216ENST00000539739 FAM172AQ8WUF8 416 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 RNF34Q969K3 372 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 KLF16Q9BXK1 252 aaPredicted RBP16.06■□□□□ 0.16
DDB1-216ENST00000539739 EPS15L1Q9UBC2 864 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 TLR6Q9Y2C9 796 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 OBSL1O75147 1896 aa16.06■□□□□ 0.16
DDB1-216ENST00000539739 CCP110O43303 1012 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 MSI1O43347 362 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 IGLV3-25P01717 112 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 HMBSP08397 361 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms