RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TMEM191CA6NGB0 347 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 PROSCO94903 275 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 OAS1P00973 400 aaKnown RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 RARGP13631 454 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TUBP50607 506 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TERF1P54274 439 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 RPL7AP62424 266 aaKnown RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 OGDHQ02218 1023 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 ARHGAP15Q53QZ3 475 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 GPR158Q5T848 1215 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 CREG2Q8IUH2 290 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 NPAS3Q8IXF0 933 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 DEFB106AQ8N104 65 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 GOLGA1Q92805 767 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TRPC7Q9HCX4 862 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 SMARCAL1Q9NZC9 954 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 NUDT5Q9UKK9 219 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 NAALADL1Q9UQQ1 740 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 MYO1FO00160 1098 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 KCNK3O14649 394 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 MDM4O15151 490 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 SPOPO43791 374 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 TLR5O60602 858 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 OLFM2O95897 454 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 RALAP11233 206 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 KRT3P12035 628 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 FLT3P36888 993 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 YWHAZP63104 245 aaKnown RBP17.97■□□□□ 0.47
CLN6-202ENST00000538696 ZNF252P-AS1Q0IIN9 211 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 HECTD3Q5T447 861 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 SYPL2Q5VXT5 272 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 BEND5Q7L4P6 421 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 EMC1Q8N766 993 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 CEP112Q8N8E3 955 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 KRT35Q92764 455 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 CD101Q93033 1021 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 SLC22A12Q96S37 553 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 SLC46A2Q9BY10 475 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 TASP1Q9H6P5 420 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 ABCC13Q9NSE7 274 aa17.97■□□□□ 0.47
CLN6-202ENST00000538696 SIGLEC16A6NMB1 481 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 COCHO43405 550 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 DDX6P26196 483 aaKnown RBP eCLIP17.96■□□□□ 0.46
CLN6-202ENST00000538696 CTNNA2P26232 953 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 RNASE9P60153 205 aaKnown RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 PITX1P78337 314 aaPredicted RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 CKAP4Q07065 602 aaKnown RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 MSANTD2Q6P1R3 559 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 DCUN1D2Q6PH85 259 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 ARCQ7LC44 396 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 ZNF276Q8N554 614 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 MAB21L3Q8N8X9 362 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 FGF13Q92913 245 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 MS4A14Q96JA4 679 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 ZSWIM3Q96MP5 696 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 MYADMQ96S97 322 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.96■□□□□ 0.46
CLN6-202ENST00000538696 IP6K2Q9UHH9 426 aa17.96■□□□□ 0.46
CLN6-202ENST00000538696 V9GYY5 206 aaPredicted RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 KIF26AQ9ULI4 1882 aaPredicted RBP17.96■□□□□ 0.46
CLN6-202ENST00000538696 C2CD4BA6NLJ0 364 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 SOBPA7XYQ1 873 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 CTIFO43310 598 aaKnown RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 TBX18O95935 607 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 NCAM1P13591 858 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 PFKLP17858 780 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 RFC1P35251 1148 aaPredicted RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 MATKP42679 507 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 TFF2Q03403 129 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 DCAF12L1Q5VU92 463 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 OTUD1Q5VV17 481 aaPredicted RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 DAB2IPQ5VWQ8 1189 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 TAC4Q86UU9 113 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 ARL14EPQ8N8R7 260 aaPredicted RBP17.95■□□□□ 0.46
CLN6-202ENST00000538696 ALG3Q92685 438 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 PBKQ96KB5 322 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 RNF38Q9H0F5 515 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLN6-202ENST00000538696 RASAL2Q9UJF2 1139 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 CDH7Q9ULB5 785 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 EYSQ5T1H1 3165 aa17.95■□□□□ 0.46
CLN6-202ENST00000538696 TRAV19A0A0A6YYK7 116 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CES2O00748 559 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 DPYSL4O14531 572 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CAPN9O14815 690 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 GPD1P21695 349 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 MAN1A1P33908 653 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CTNNA1P35221 906 aaKnown RBP17.94■□□□□ 0.46
CLN6-202ENST00000538696 NOS2P35228 1153 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 TAS2R40P59535 323 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 EFEMP1Q12805 493 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 NAA30Q147X3 362 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms