RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 COG7P83436 770 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF252P-AS1Q0IIN9 211 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PEAR1Q5VY43 1037 aaPredicted RBP20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC23A3Q6PIS1 610 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 IPO4Q8TEX9 1081 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SEMA4DQ92854 862 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 BHMTQ93088 406 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 TMEM176AQ96HP8 235 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 GABRG3Q99928 467 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RAB20Q9NX57 234 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PLK2Q9NYY3 685 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ATXN2Q99700 1313 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 FAM208BQ5VWN6 2430 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 EPB41P11171 864 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 NDUFV2P19404 249 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 KIAA1211LQ6NV74 962 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 DEFB119Q8N690 84 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CEP76Q8TAP6 659 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 EEF2KMTQ96G04 330 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 UBXN6Q9BZV1 441 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 FAM124BQ9H5Z6 455 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CD248Q9HCU0 757 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CISHQ9NSE2 258 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RASAL2Q9UJF2 1139 aa20.67■□□□□ 0.9
TNFRSF1B-204ENST00000536782 IGHV1OR15-9A0A0B4J2B8 117 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 GFRA2O00451 464 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CETN3O15182 167 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 KLKB1P03952 638 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CFIP05156 583 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ENGP17813 658 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CHKAP35790 457 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 MAPK8P45983 427 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RAD23BP54727 409 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF33AQ06730 810 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 EFEMP1Q12805 493 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 DUOXA1Q1HG43 343 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SMYD4Q8IYR2 804 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ARHGAP18Q8N392 663 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC4A11Q8NBS3 891 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ERLEC1Q96DZ1 483 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 DCLK3Q9C098 648 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CACNA2D2Q9NY47 1150 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 FBXO10Q9UK96 956 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC6A14Q9UN76 642 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CYP8B1Q9UNU6 501 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RAD54BQ9Y620 910 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZFYVE26Q68DK2 2539 aa20.66■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PENKP01210 267 aaPredicted RBP20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC8A3P57103 927 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ARHGAP17Q68EM7 881 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RABEPKQ7Z6M1 372 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PIGZQ86VD9 579 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ARID3AQ99856 593 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 WASF3Q9UPY6 502 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC27A6Q9Y2P4 619 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 WDFY3Q8IZQ1 3526 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CACNA1GO43497 2377 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SPEGQ15772 3267 aa20.65■□□□□ 0.9
TNFRSF1B-204ENST00000536782 HMBSP08397 361 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SERPINF2P08697 491 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CORO1AP31146 461 aaKnown RBP20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ATXN3P54252 364 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GFPT1Q06210 699 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FOXC1Q12948 553 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 RAB41Q5JT25 222 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FYB2Q5VWT5 728 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 RSRC2Q7L4I2 434 aaKnown RBP20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ANKRD52Q8NB46 1076 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DEFB124Q8NES8 71 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TATDN2Q93075 761 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 MRGPRX1Q96LB2 322 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC32A1Q9H598 525 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 RMND1Q9NWS8 449 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 STRIP2Q9ULQ0 834 aa20.64■□□□□ 0.89
TNFRSF1B-204ENST00000536782 WASH3PC4AMC7 463 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 YWHAGP61981 247 aaKnown RBP eCLIP20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PNOCQ13519 176 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 STARD3Q14849 445 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TCERG1LQ5VWI1 586 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DENND1CQ8IV53 801 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 P2RY11Q96G91 374 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 MARCH2Q9P0N8 246 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 AGO1Q9UL18 857 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 STON1Q9Y6Q2 735 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PCDH15Q96QU1 1955 aa20.63■□□□□ 0.89
TNFRSF1B-204ENST00000536782 NPC1O15118 1278 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 NDUFS2O75306 463 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CYBBP04839 570 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PRCPP42785 496 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TKTL1P51854 596 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 MFAP3P55082 362 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DCAF17Q5H9S7 520 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 KIAA1324Q6UXG2 1013 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC41A1Q8IVJ1 513 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 UCMAQ8WVF2 138 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 HSPA12BQ96MM6 686 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TSG101Q99816 390 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms