RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 Q9Y3F1 56 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 PCDHA3Q9Y5H8 950 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CFAP20Q9Y6A4 193 aaKnown RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 ASTN1O14525 1302 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 MCM3APO60318 1980 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CHD9Q3L8U1 2897 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 GOLGA6BA6NDN3 693 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 RANBP6O60518 1105 aaKnown RBP5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MFAP3LO75121 409 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 FTLP02792 175 aaPredicted RBP5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 ICAM1P05362 532 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SBK3P0C264 359 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SUPT20HL2P0C7V6 817 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MX1P20591 662 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MAP2K6P52564 334 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 CCL23P55773 120 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SNAP25P60880 206 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 LCE4AQ5TA78 99 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 C1QL3Q5VWW1 255 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 NXNQ6DKJ4 435 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 PPP4R3AQ6IN85 833 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 TAPT1Q6NXT6 567 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF529Q6P280 563 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 TTC7BQ86TV6 843 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 GSPT2Q8IYD1 628 aaKnown RBP5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SH2D3CQ8N5H7 860 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 TTC8Q8TAM2 541 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MIEF2Q96C03 454 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 BORCS6Q96GS4 357 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SEC62Q99442 399 aaKnown RBP5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 MPHOSPH6Q99547 160 aaKnown RBP5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 SLC28A3Q9HAS3 691 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 PNMA2Q9UL42 364 aa5.84□□□□□ -1.48
AMBRA1-209ENST00000529963 RAD50Q92878 1312 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 PKD1L2Q7Z442 2459 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 CHD7Q9P2D1 2997 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 TBKBP1A7MCY6 615 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 VSTM5A8MXK1 200 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 PRR5-ARHGAP8B1AHC4 643 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 KIAA0391O15091 583 aaKnown RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 SGTAO43765 313 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ORC4O43929 436 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 NMT2O60551 498 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 MYL1P05976 194 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 CPT1AP50416 773 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 SCNN1GP51170 649 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ALDH5A1P51649 535 aaPredicted RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 PSMC6P62333 389 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 TLE1Q04724 770 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 BAATQ14032 418 aaPredicted RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 BMT2Q1RMZ1 405 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 MINDY4Q4G0A6 757 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ARHGAP29Q52LW3 1261 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 CCDC157Q569K6 752 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 CXorf57Q6NSI4 855 aaKnown RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 APBB1IPQ7Z5R6 666 aaPredicted RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 TFAP2CQ92754 450 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 RGMAQ96B86 450 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 EVI5LQ96CN4 794 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 RPS6KC1Q96S38 1066 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 WDR11Q9BZH6 1224 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 KLC2Q9H0B6 622 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 TRPV6Q9H1D0 765 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ALDH8A1Q9H2A2 487 aaPredicted RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 RANBP17Q9H2T7 1088 aaKnown RBP5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 PDGFCQ9NRA1 345 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 IL17RBQ9NRM6 502 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 FBXO34Q9NWN3 711 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 ANAPC4Q9UJX5 808 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 TCAF1Q9Y4C2 921 aa5.83□□□□□ -1.48
AMBRA1-209ENST00000529963 GRIN2DO15399 1336 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 UMODL1Q5DID0 1318 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 B4DLN1 442 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 B5MCH6 92 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 PI4K2BG5E9Z4 385 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 IPO13O94829 963 aaKnown RBP5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 MYL3P08590 195 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 TOP1P11387 765 aaKnown RBP5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 ACTN1P12814 892 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 MALP21145 153 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 SLC16A2P36021 539 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 NOVP48745 357 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 MRPL12P52815 198 aaKnown RBP5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 RABGGTBP53611 331 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 CLRN1P58418 232 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 CTXN1P60606 82 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 CREMQ03060 361 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 PTH1RQ03431 593 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 PPP2R5BQ15173 497 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 ALX1Q15699 326 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 HS1BP3Q53T59 392 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 RASGRP2Q7LDG7 609 aa5.82□□□□□ -1.48
AMBRA1-209ENST00000529963 GPRIN1Q7Z2K8 1008 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms