RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 FBXO36Q8NEA4 188 aa9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 MYCBPAPQ8TBZ2 947 aa9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 CELF6Q96J87 481 aaKnown RBP9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 CDK5RAP1Q96SZ6 601 aaKnown RBP9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 DPEP3Q9H4B8 488 aa9.13□□□□□ -0.95
PPFIA1-206ENST00000526262 ARVCFO00192 962 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LRCH4O75427 683 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ZNF135P52742 658 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ANKRD20A8PQ5CZ79 823 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 RABGAP1LQ5R372 815 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 TIGD7Q6NT04 549 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 RAB44Q7Z6P3 723 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LINC00523Q86TU6 105 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 UNC45BQ8IWX7 931 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 STK32AQ8WU08 396 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 HTR3CQ8WXA8 447 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ARL8AQ96BM9 186 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ATXN7L3BQ96GX2 97 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 RNF186Q9NXI6 227 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 CNTN3Q9P232 1028 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 OR12D3Q9UGF7 316 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SIX4Q9UIU6 781 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SMG5Q9UPR3 1016 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LIASO43766 372 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 PECAM1P16284 738 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 TUBP50607 506 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 USP41Q3LFD5 358 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SDCCAG8Q86SQ7 713 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LRRC6Q86X45 466 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 COLGALT1Q8NBJ5 622 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 APBB2Q92870 758 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 BHMTQ93088 406 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ALKBH8Q96BT7 664 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 C10orf88Q9H8K7 445 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 HMGXB4Q9UGU5 601 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 MYH7BA7E2Y1 1941 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 KCNK1O00180 336 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ZSCAN5DPP0CG00 497 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 RBL1P28749 1068 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 GPD2P43304 727 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 DRG2P55039 364 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 GEMIN4P57678 1058 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ITIH5Q86UX2 942 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ARHGAP24Q8N264 748 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ZNF669Q96BR6 464 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 CHMP6Q96FZ7 201 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 TWNKQ96RR1 684 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ACBD6Q9BR61 282 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 AAR2Q9Y312 384 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 COL11A2P13942 1736 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SDR42E2A6NKP2 422 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 OR6C75A6NL08 312 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 H0Y626 953 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 PPEF2O14830 753 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ITGBL1O95965 494 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 KCNE1P15382 129 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SERPINB9P50453 376 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 CDH18Q13634 790 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ARHGAP17Q68EM7 881 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SLC26A9Q7LBE3 791 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LRRC43Q8N309 656 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 LZTR1Q8N653 840 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ASIC4Q96FT7 647 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 ZNF670Q9BS34 389 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 NAT9Q9BTE0 207 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 PRDM16Q9HAZ2 1276 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 MARCH2Q9P0N8 246 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 RPS6KL1Q9Y6S9 549 aa9.12□□□□□ -0.95
PPFIA1-206ENST00000526262 SASH3O75995 380 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 SNRPAP09012 282 aaKnown RBP9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 FGFR1P11362 822 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 CHN1P15882 459 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 WARSP23381 471 aaKnown RBP9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 TM4SF4P48230 202 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 DDR2Q16832 855 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 UGP2Q16851 508 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 TTC31Q49AM3 519 aaPredicted RBP9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 STRADAQ7RTN6 431 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 CCNJLQ8IV13 435 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 CEP41Q9BYV8 373 aa9.11□□□□□ -0.95
PPFIA1-206ENST00000526262 BRD8Q9H0E9 1235 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms