RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 FAM131BQ86XD5 332 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM25Q86YD3 366 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGAP18Q8N392 663 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FLCNQ8NFG4 579 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 STK32AQ8WU08 396 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 RXFP2Q8WXD0 754 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ATRIPQ8WXE1 791 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 IRGQQ8WZA9 623 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGEF26Q96DR7 871 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CHFRQ96EP1 664 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CEP295NLQ96MC4 621 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DNAJC7Q99615 494 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ANP32EQ9BTT0 268 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 EDEM3Q9BZQ6 932 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FOXQ1Q9C009 403 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 THAP2Q9H0W7 228 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DEF6Q9H4E7 631 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM204AQ9H8W3 233 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TRPV4Q9HBA0 871 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 POPDC2Q9HBU9 364 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FBRSL1Q9HCM7 1045 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ANLNQ9NQW6 1124 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ABCC13Q9NSE7 274 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 RBM12Q9NTZ6 932 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 PIGVQ9NUD9 493 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 POLR3BQ9NW08 1133 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNHIT6Q9NWK9 470 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 GPATCH2LQ9NWQ4 482 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DDIT4Q9NX09 232 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CLIC5Q9NZA1 410 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 STIM2Q9P246 746 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 IGSF9Q9P2J2 1179 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CNOT8Q9UFF9 292 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM59LQ9UK28 342 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 AGO1Q9UL18 857 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 STRIP2Q9ULQ0 834 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 MYO6Q9UM54 1294 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGAP26Q9UNA1 814 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DUSP12Q9UNI6 340 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 MTF2Q9Y483 593 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DAAM1Q9Y4D1 1078 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ZFP37Q9Y6Q3 630 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 NOTCH4Q99466 2003 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 MYO9BQ13459 2157 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TCRBV5S1A1TA0A578 114 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM221A6NGB7 291 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SHISA7A6NL88 538 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 NEDD8-MDP1E9PL57 170 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 I6L893 689 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 M0R296 226 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ARNTLO00327 626 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 IRAK2O43187 625 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CCP110O43303 1012 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 AKR1B10O60218 316 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 HSF2BPO75031 334 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DAB1O75553 588 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CYP17A1P05093 508 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CALB1P05937 261 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DCNP07585 359 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SRFP11831 508 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 KRT3P12035 628 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TCF4P15884 667 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC6A4P31645 630 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 HNRNPH3P31942 346 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 GJC1P36383 396 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 MATKP42679 507 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PSEN1P49768 467 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TUBP50607 506 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SEC13P55735 322 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CDK17Q00537 523 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DEUP1Q05D60 604 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 KDSRQ06136 332 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF252P-AS1Q0IIN9 211 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 FCHO2Q0JRZ9 810 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 MAMLD1Q13495 774 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 RUNX3Q13761 415 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF268Q14587 947 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 UBXN2BQ14CS0 331 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PON2Q15165 354 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DHCR24Q15392 516 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIP4Q15650 581 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 MEA1Q16626 185 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ASTE1Q2TB18 679 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 EML3Q32P44 896 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 RAP1GAP2Q684P5 730 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SCYL2Q6P3W7 929 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ALKBH5Q6P6C2 394 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 RHBDF2Q6PJF5 856 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 RAD9BQ6WBX8 426 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM72Q6ZMU5 477 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 Q6ZNB5 142 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM67Q6ZTA4 783 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TOGARAM2Q6ZUX3 1019 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms