RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 RING1Q06587 406 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 DHCR24Q15392 516 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 TMEM196Q5HYL7 178 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 OLFML1Q6UWY5 402 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 ERICH1Q86X53 443 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 C18orf8Q96DM3 657 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 IRX2Q9BZI1 471 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 MARK1Q9P0L2 795 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 DLGAP2Q9P1A6 1054 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 NDRG2Q9UN36 371 aaKnown RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 KIAA1549LQ6ZVL6 1849 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 ITIH6Q6UXX5 1313 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 PI15O43692 258 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 IGLV3-27P01718 113 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 FYNP06241 537 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CHRNB1P11230 501 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 ADH5P11766 374 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CHRNB2P17787 502 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 DRD1P21728 446 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CD72P21854 359 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CORO1AP31146 461 aaKnown RBP13.1□□□□□ -0.31
VEGFA-225ENST00000523950 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
VEGFA-225ENST00000523950 MTA1Q13330 715 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 FBXO43Q4G163 708 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 OR6B2Q6IFH4 312 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 RHBDF2Q6PJF5 856 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 FAM217AQ8IXS0 508 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CPXM2Q8N436 756 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 DTWD2Q8NBA8 298 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 TTC8Q8TAM2 541 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 DQX1Q8TE96 717 aaKnown RBP13.1□□□□□ -0.31
VEGFA-225ENST00000523950 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 CD101Q93033 1021 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 WBP2Q969T9 261 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 IRF2BPLQ9H1B7 796 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 RRN3Q9NYV6 651 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
VEGFA-225ENST00000523950 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 DAB1O75553 588 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 IGLV3-25P01717 112 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 KLKB1P03952 638 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 MMP8P22894 467 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 PRKCIP41743 596 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 TBX4P57082 545 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 CENPCQ03188 943 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 ARID5AQ03989 594 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 FZD5Q13467 585 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 CCINQ13939 588 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 PON2Q15165 354 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 ASIC2Q16515 512 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 GAB4Q2WGN9 574 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 LY6G5CQ5SRR4 150 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 MAMSTRQ6ZN01 415 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 ARCQ7LC44 396 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 IRF2BP2Q7Z5L9 587 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 SYN2Q92777 582 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 CHRDQ9H2X0 955 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 STOML2Q9UJZ1 356 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 AGO1Q9UL18 857 aaKnown RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 NAALADL1Q9UQQ1 740 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 TLR6Q9Y2C9 796 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 MTF2Q9Y483 593 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-225ENST00000523950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.09□□□□□ -0.318e-8■□□□□ 9.1
VEGFA-225ENST00000523950 TRIOO75962 3097 aa13.09□□□□□ -0.31
VEGFA-225ENST00000523950 F5P12259 2224 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 IRAK2O43187 625 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 HMBSP08397 361 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 COL9A1P20849 921 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 GBP1P32455 592 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms