RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DKK3Q9UBP4 350 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ASAP1Q9ULH1 1129 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 STX16-NPEPL1H3BU86 382 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 STX16O14662 325 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 NKX2-8O15522 239 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CYP27B1O15528 508 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 LARGE1O95461 756 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 RHOP08100 348 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 IL6RP08887 468 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CSF1P09603 554 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 IFIT1P09914 478 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 EGR2P11161 476 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 RXRAP19793 462 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 AKT1P31749 480 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 RPL15P61313 204 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC12A1Q13621 1099 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 BAK1Q16611 211 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 AAK1Q2M2I8 961 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CCDC144NLQ6NUI1 221 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 GLB1LQ6UWU2 654 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 NEK10Q6ZWH5 1172 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 RSRC2Q7L4I2 434 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 TTC9BQ8N6N2 239 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 EXD3Q8N9H8 876 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 USP38Q8NB14 1042 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CPEB3Q8NE35 698 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CEP70Q8NHQ1 597 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 MYCBPAPQ8TBZ2 947 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 C3orf49Q96BT1 292 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZBTB10Q96DT7 871 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 LOXL4Q96JB6 756 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 THAP7Q9BT49 309 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 PAIP1Q9H074 479 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 RMI1Q9H9A7 625 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 PLEKHA2Q9HB19 425 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 PREBQ9HCU5 417 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 SEPSECSQ9HD40 501 aaKnown RBP3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC22A11Q9NSA0 550 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC45A1Q9Y2W3 748 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 AFG3L2Q9Y4W6 797 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 CYP46A1Q9Y6A2 500 aa3.91□□□□□ -1.78
HMGN1P28-201ENST00000521340 A0A087X0M5 115 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CCDC187A0A096LP49 1063 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CENPVL1A0A0U1RR11 272 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 A0A1B0GX30 115 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 KIAA0355O15063 1070 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC16A3O15427 465 aaKnown RBP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 PMPCBO75439 489 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 RNASEH2AO75792 299 aaKnown RBP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 KRT38O76015 456 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CDKL5O76039 1030 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 NDUFA10O95299 355 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CHN1P15882 459 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 IGFBP2P18065 325 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 DDX6P26196 483 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 MCM2P49736 904 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 DCAF7P61962 342 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 SATB1Q01826 763 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM187BQ17R55 369 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 LRRC24Q50LG9 513 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 WDR78Q5VTH9 848 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ATG16L1Q676U5 607 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ANO7Q6IWH7 933 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ARMC6Q6NXE6 501 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CAND1Q86VP6 1230 aaKnown RBP3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ARHGEF19Q8IW93 802 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 SSH3Q8TE77 659 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ATRIPQ8WXE1 791 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 CPT1BQ92523 772 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 RNF31Q96EP0 1072 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 NEUROD6Q96NK8 337 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 PRR25Q96S07 402 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 SERINC2Q96SA4 455 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 USP44Q9H0E7 712 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 SAP30LQ9HAJ7 183 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 TBC1D22BQ9NU19 505 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZDHHC7Q9NXF8 308 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 STEAP1Q9UHE8 339 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 ST6GALNAC2Q9UJ37 374 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 NFU1Q9UMS0 254 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 TESMINQ9Y4I5 508 aa3.9□□□□□ -1.79
HMGN1P28-201ENST00000521340 A6NCN8 305 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 SAC3D1A6NKF1 404 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 DHX16O60231 1041 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM20BO75063 409 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 KAT7O95251 611 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 HNRNPA1P09651 372 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 PEPDP12955 493 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ACP5P13686 325 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ALADP13716 330 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 CTGFP29279 349 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 GKP32189 559 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 CASP6P55212 293 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms