RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CDH23Q9H251 3354 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 M0QYT0 321 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 CLDN5O00501 218 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 PPP1R12AO14974 1030 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 CHADO15335 359 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 CPP00450 1065 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 POMCP01189 267 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 IGHA2P01877 340 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 BRAFP15056 766 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 STX2P32856 288 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 MMP13P45452 471 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 AIF1P55008 147 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 HDAC4P56524 1084 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 YWHAGP61981 247 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 NKX3-2P78367 333 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 IFI35P80217 286 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 MRPS5P82675 430 aaKnown RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 PPARDQ03181 441 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 NME3Q13232 169 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 XRCC4Q13426 336 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 TUSC3Q13454 348 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 DPYSL2Q16555 572 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 HP1BP3Q5SSJ5 553 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 UNC45BQ8IWX7 931 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 SRRM1Q8IYB3 904 aaKnown RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 FUKQ8N0W3 1084 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 ANKLE1Q8NAG6 615 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 SLC7A14Q8TBB6 771 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 PWWP2AQ96N64 755 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-204ENST00000517824 SMC6Q96SB8 1091 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 ADAM2Q99965 735 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 GDF15Q99988 308 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 ADAM7Q9H2U9 754 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 POPDC2Q9HBU9 364 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 RAB6BQ9NRW1 208 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 SLC24A2Q9UI40 661 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 NME7Q9Y5B8 376 aa11.17□□□□□ -0.62
SPIDR-204ENST00000517824 ATXN2Q99700 1313 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 BCLAF3A2AJT9 711 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 DCDC2CA8MYV0 355 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 RASA4BC9J798 803 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 EEF2KO00418 725 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 RASA4O43374 803 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ATP2C2O75185 946 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 B3GAT3O94766 335 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ENDOD1O94919 500 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 IFNAR2P48551 515 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 GDF10P55107 478 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 TPI1P60174 286 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 LPIN1Q14693 890 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 RNF187Q5TA31 235 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 SLC9A4Q6AI14 798 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 OVOS1Q6IE37 1185 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 C4orf50Q6ZRC1 276 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 CLEC20AQ6ZU45 233 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 MRPL10Q7Z7H8 261 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 TADA2BQ86TJ2 420 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 FAM131BQ86XD5 332 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 PLD5Q8N7P1 536 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 TFB1MQ8WVM0 346 aaKnown RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 CPT1BQ92523 772 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 WNT8BQ93098 351 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 RNF34Q969K3 372 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 MYLPFQ96A32 169 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 QKIQ96PU8 341 aaKnown RBP eCLIP11.16□□□□□ -0.627e-9■■■■■ 36.4
SPIDR-204ENST00000517824 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 KCTD15Q96SI1 283 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ZMYND8Q9ULU4 1186 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-204ENST00000517824 ACTL7BQ9Y614 415 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
SPIDR-204ENST00000517824 CLUHO75153 1309 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 GABRDO14764 452 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 ALOX15BO15296 676 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CREB3O43889 395 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms