RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 SF3A2Q15428 464 aaKnown RBP18.53■□□□□ 0.56
SFXN1-212ENST00000515791 CNGA2Q16280 664 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 EOGTQ5NDL2 527 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 C10orf76Q5T2E6 689 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 GRAMD4Q6IC98 578 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 RRAGAQ7L523 313 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 PPM1KQ8N3J5 372 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 ZNF513Q8N8E2 541 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-212ENST00000515791 ACOX2Q99424 681 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 MARCH2Q9P0N8 246 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.53■□□□□ 0.56
SFXN1-212ENST00000515791 INVSQ9Y283 1065 aa18.53■□□□□ 0.56
SFXN1-212ENST00000515791 ABCA7Q8IZY2 2146 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 A0A1W2PQF6 199 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 GFRA2O00451 464 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 SLC30A4O14863 429 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 GNA14O95837 355 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 SETSIPP0DME0 302 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 CORO1AP31146 461 aaKnown RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 P2RY2P41231 377 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 SLC8A3P57103 927 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 TRIP4Q15650 581 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 PREPLQ4J6C6 727 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 EGFLAMQ63HQ2 1017 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 PMS2CLQ68D20 193 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 PMF1Q6P1K2 205 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 IRF2BP1Q8IU81 584 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 FRMD1Q8N878 549 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 NETO1Q8TDF5 533 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 XPO6Q96QU8 1125 aaKnown RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 RTKNQ9BST9 563 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 PLK2Q9NYY3 685 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 HESX1Q9UBX0 185 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 CDV3Q9UKY7 258 aaKnown RBP18.52■□□□□ 0.56
SFXN1-212ENST00000515791 ZNF510Q9Y2H8 683 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 PCDHB4Q9Y5E5 795 aa18.52■□□□□ 0.56
SFXN1-212ENST00000515791 FOXD2O60548 495 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 HMBSP08397 361 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 MPLP40238 635 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 DAOAP59103 153 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 CAMK4Q16566 473 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 USP39Q53GS9 565 aaKnown RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 BSPRYQ5W0U4 402 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 CPXM2Q8N436 756 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 RBBP8NLQ8NC74 664 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 DCLK3Q9C098 648 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 SMOC1Q9H4F8 434 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 LRRC4Q9HBW1 653 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 POLMQ9NP87 494 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 CNGB3Q9NQW8 809 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 MBD1Q9UIS9 605 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 RWDD2AQ9UIY3 292 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 CLEC4EQ9ULY5 219 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 SLC27A6Q9Y2P4 619 aa18.51■□□□□ 0.55
SFXN1-212ENST00000515791 TNRC6BQ9UPQ9 1833 aaKnown RBP18.51■□□□□ 0.55
SFXN1-212ENST00000515791 SLC12A8A0AV02 714 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 BCLAF3A2AJT9 711 aaKnown RBP18.5■□□□□ 0.55
SFXN1-212ENST00000515791 DCDC2BA2VCK2 349 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 TM4SF5O14894 197 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 RHOBTB1O94844 696 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
SFXN1-212ENST00000515791 NTSR1P30989 418 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 CHKAP35790 457 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 RPL34P49207 117 aaKnown RBP18.5■□□□□ 0.55
SFXN1-212ENST00000515791 DGKGP49619 791 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 MAP7D1Q3KQU3 841 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 DENND1CQ8IV53 801 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 RLN3Q8WXF3 142 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 BHMTQ93088 406 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 PLD4Q96BZ4 506 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 GABRG3Q99928 467 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 INTS2Q9H0H0 1204 aaKnown RBP18.5■□□□□ 0.55
SFXN1-212ENST00000515791 SFMBT1Q9UHJ3 866 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 STOML2Q9UJZ1 356 aa18.5■□□□□ 0.55
SFXN1-212ENST00000515791 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.5■□□□□ 0.55
SFXN1-212ENST00000515791 NUP205Q92621 2012 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 TCRBV21S2A2A0A5A6 115 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 ALDH1A2O94788 518 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 GABRG2P18507 467 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 RGS7P49802 495 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 LIMK1P53667 647 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 MFAP3P55082 362 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 CETN1Q12798 172 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 ELF2Q15723 593 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 KIAA1211LQ6NV74 962 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 RSRC2Q7L4I2 434 aaKnown RBP18.49■□□□□ 0.55
SFXN1-212ENST00000515791 TRMT11Q7Z4G4 463 aaKnown RBP18.49■□□□□ 0.55
SFXN1-212ENST00000515791 C11orf74Q86VG3 221 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 FMNL3Q8IVF7 1028 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 EDEM1Q92611 657 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 PIWIL1Q96J94 861 aaKnown RBP18.49■□□□□ 0.55
SFXN1-212ENST00000515791 VPS45Q9NRW7 570 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 ABCC13Q9NSE7 274 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 OLA1Q9NTK5 396 aaKnown RBP18.49■□□□□ 0.55
SFXN1-212ENST00000515791 STRIP2Q9ULQ0 834 aa18.49■□□□□ 0.55
SFXN1-212ENST00000515791 THADAQ6YHU6 1953 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms