RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 TC2NQ8N9U0 490 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 C3orf20Q8ND61 904 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 CSGALNACT1Q8TDX6 532 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 DQX1Q8TE96 717 aaKnown RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNF8-215ENST00000515572 CCDC42Q96M95 316 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 PANX2Q96RD6 677 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 TAS2R14Q9NYV8 317 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNF8-215ENST00000515572 TMEM59LQ9UK28 342 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 ZNF510Q9Y2H8 683 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 A0A087X0T9 212 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 FAM170AA1A519 330 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 GRAP2O75791 330 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 NFATC1O95644 943 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 LATS1O95835 1130 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 IGLV3-25P01717 112 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 FAM228BP0C875 321 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 IRF1P10914 325 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 KRT3P12035 628 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 GLULP15104 373 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 GBP1P32455 592 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 EIF4A3P38919 411 aaKnown RBP12.41□□□□□ -0.42
SNF8-215ENST00000515572 HARS2P49590 506 aaKnown RBP12.41□□□□□ -0.42
SNF8-215ENST00000515572 TBX4P57082 545 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 RNASE9P60153 205 aaKnown RBP12.41□□□□□ -0.42
SNF8-215ENST00000515572 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 MTA1Q13330 715 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 ITPRIPL2Q3MIP1 535 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 CPA6Q8N4T0 437 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 MSANTD3Q96H12 275 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 ZFYVE19Q96K21 471 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 NPY6RQ99463 290 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
SNF8-215ENST00000515572 PARVAQ9NVD7 372 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 FBXL21Q9UKT6 434 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
SNF8-215ENST00000515572 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 SIGLEC16A6NMB1 481 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 IRAK2O43187 625 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 AKR1B10O60218 316 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 GREM1O60565 184 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 TRUB2O95900 331 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 F9P00740 461 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 SLC2A3P11169 496 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 RRM1P23921 792 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 CORO1AP31146 461 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 PRKCQQ04759 706 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 NR1H3Q13133 447 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 RUNX3Q13761 415 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 ASTE1Q2TB18 679 aaPredicted RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 EML3Q32P44 896 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 ALKBH5Q6P6C2 394 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 Q6ZNB5 142 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 SHDQ96IW2 340 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 CHP1Q99653 195 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 FAM204AQ9H8W3 233 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
SNF8-215ENST00000515572 PAXBP1Q9Y5B6 917 aa12.4□□□□□ -0.42
SNF8-215ENST00000515572 M0QYT0 321 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 ADH1CP00326 375 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 APOEP02649 317 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 KLKB1P03952 638 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 HMBSP08397 361 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 DESP17661 470 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 SDC4P31431 198 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 CHKAP35790 457 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 FLT3P36888 993 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 SLC11A2P49281 568 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 AMPD2Q01433 879 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 SLC44A4Q53GD3 710 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms