RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 PREPLQ4J6C6 727 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-209ENST00000511752 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 FSTL4Q6MZW2 842 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 BEND5Q7L4P6 421 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 SPEM1Q8N4L4 309 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 CCDC26Q8TAB7 109 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-209ENST00000511752 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 FBXO4Q9UKT5 387 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
PTCD2-209ENST00000511752 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 TEX33O43247 280 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 HOXC11O43248 304 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 EGFP01133 1207 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 KLKB1P03952 638 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 GLI1P08151 1106 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 CCR3P51677 355 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 GAB4Q2WGN9 574 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 EFHC1Q5JVL4 640 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 DENND1CQ8IV53 801 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 FAM122AQ96E09 287 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 SERPINB11Q96P15 392 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 PNKPQ96T60 521 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 FBRSL1Q9HCM7 1045 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 AGO1Q9UL18 857 aaKnown RBP13.03□□□□□ -0.32
PTCD2-209ENST00000511752 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
PTCD2-209ENST00000511752 A0A1W2PQC6 194 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 MSI1O43347 362 aaKnown RBP13.02□□□□□ -0.33
PTCD2-209ENST00000511752 HSF2BPO75031 334 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 ATG13O75143 517 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 ERBB2P04626 1255 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 CYBBP04839 570 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 APODP05090 189 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 MMEP08473 750 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 TBX4P57082 545 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 CDR2Q01850 454 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 CSTF1Q05048 431 aaKnown RBP13.02□□□□□ -0.33
PTCD2-209ENST00000511752 RING1Q06587 406 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NNTQ13423 1086 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 PTPN20Q4JDL3 420 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NUGGCQ68CJ6 796 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.33
PTCD2-209ENST00000511752 Q6ZS52 159 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 ZDHHC17Q8IUH5 632 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
PTCD2-209ENST00000511752 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 TJP2Q9UDY2 1190 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
PTCD2-209ENST00000511752 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 NAALADL1Q9UQQ1 740 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
PTCD2-209ENST00000511752 RNF40O75150 1001 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 LATS1O95835 1130 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 FYNP06241 537 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 SP9P0CG40 484 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 TYRP14679 529 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 FERP16591 822 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 PLA2G5P39877 138 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 CXCL12P48061 93 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 SLC6A11P48066 632 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 ZNF445P59923 1031 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 FANCCQ00597 558 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 SLC6A3Q01959 620 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 KDSRQ06136 332 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 ZNF528Q3MIS6 628 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 ETFBKMTQ8IXQ9 262 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 CPXM2Q8N436 756 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 NAT16Q8N8M0 369 aa13.01□□□□□ -0.33
PTCD2-209ENST00000511752 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms