RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ARHGEF19	Q8IW93	802 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	FUK	Q8N0W3	1084 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ANKRD52	Q8NB46	1076 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	NEK11	Q8NG66	645 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	MYLPF	Q96A32	169 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ELMO3	Q96BJ8	720 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	TRMT2B	Q96GJ1	504 aa	Known RBP	10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ZC3H10	Q96K80	434 aa	Known RBP	10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	MYRFL	Q96LU7	910 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	SEPT5	Q99719	369 aa	Predicted RBP	10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ARID3A	Q99856	593 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	MED10	Q9BTT4	135 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	NAA15	Q9BXJ9	866 aa	Known RBP	10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	B3GNT5	Q9BYG0	378 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	EDEM3	Q9BZQ6	932 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	GPR88	Q9GZN0	384 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	CRISPLD1	Q9H336	500 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	DPEP3	Q9H4B8	488 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	BRD9	Q9H8M2	597 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ATP13A2	Q9NQ11	1180 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	DNAJC12	Q9UKB3	198 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	MYO6	Q9UM54	1294 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	SIK3	Q9Y2K2	1263 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	ADAMTS9	Q9P2N4	1935 aa		10.84	□□□□□ -0.67
PTPN20-222	ENST00000509774	CDX4	O14627	284 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	CBFA2T2	O43439	604 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	MED7	O43513	233 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	HCRT	O43612	131 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	RTN3	O95197	1032 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM200B	P0CF97	657 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	JUND	P17535	347 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	PXN	P49023	591 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	SKOR1	P84550	965 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	PTK2	Q05397	1052 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	SYCP1	Q15431	976 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF394	Q53GI3	561 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	LCLAT1	Q6UWP7	414 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	DENND5B	Q6ZUT9	1274 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	PAQR9	Q6ZVX9	377 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM35A	Q86V20	835 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM71A	Q8IYT1	594 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	C12orf29	Q8N999	325 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	SLC2A14	Q8TDB8	520 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	HPS1	Q92902	700 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	ELSPBP1	Q96BH3	223 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	MCRS1	Q96EZ8	462 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	TWNK	Q96RR1	684 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	NUP58	Q9BVL2	599 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	DUSP16	Q9BY84	665 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	ASAH2	Q9NR71	780 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	GDE1	Q9NZC3	331 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	IL37	Q9NZH6	218 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	DNMT3B	Q9UBC3	853 aa	Known RBP	10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	HESX1	Q9UBX0	185 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	RAI2	Q9Y5P3	530 aa		10.83	□□□□□ -0.68
PTPN20-222	ENST00000509774	GON4L	Q3T8J9	2241 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	RNF225	M0QZC1	329 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	FOXN3	O00409	490 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	AP1G2	O75843	785 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	NOL4	O94818	638 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	RHO	P08100	348 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	CCDC172	P0C7W6	258 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	PFKL	P17858	780 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	CDC25C	P30307	473 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	DRAP1	Q14919	205 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	DDR2	Q16832	855 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	SLC5A9	Q2M3M2	681 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	PLK5	Q496M5	336 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	FIGN	Q5HY92	759 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	PDZD4	Q76G19	769 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	SCN4B	Q8IWT1	228 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	NUP93	Q8N1F7	819 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	OVCA2	Q8WZ82	227 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	KAT5	Q92993	513 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	CORO1B	Q9BR76	489 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	TTLL2	Q9BWV7	592 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	LRRC3	Q9BY71	257 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF518B	Q9C0D4	1074 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	FBXO44	Q9H4M3	255 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	TMEM9B	Q9NQ34	198 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	TRPV5	Q9NQA5	729 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	HMGXB4	Q9UGU5	601 aa		10.82	□□□□□ -0.68
PTPN20-222	ENST00000509774	SPAAR	A0A1B0GVQ0	90 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM92A	A1XBS5	289 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	SLC38A8	A6NNN8	435 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774		F8VP50	259 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774		O00370	1275 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	CLDN5	O00501	218 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	TEX33	O43247	280 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	SETSIP	P0DME0	302 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	KRT5	P13647	590 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	CD19	P15391	556 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	HMGA1	P17096	107 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms