RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 BPIFB1Q8TDL5 484 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 DEPDC1BQ8WUY9 529 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 MRPS31Q92665 395 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 DNASE1L2Q92874 299 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 NXPE3Q969Y0 559 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 MYEOVQ96EZ4 313 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 ZFP14Q9HCL3 533 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 FBRSL1Q9HCM7 1045 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 GKN1Q9NS71 199 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 POLR3BQ9NW08 1133 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 OBP2AQ9NY56 170 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 CALCOCO1Q9P1Z2 691 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 UXTQ9UBK9 157 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 CHORDC1Q9UHD1 332 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 WASF2Q9Y6W5 498 aa7.58□□□□□ -1.2
TOPBP1-207ENST00000509162 TRAV19A0A0A6YYK7 116 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 LRRC10BA6NIK2 292 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 E5RJQ4 531 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 GFRA2O00451 464 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TRIM24O15164 1050 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 CHADO15335 359 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 RTN3O95197 1032 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 FGFR1OPO95684 399 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 FGF19O95750 216 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 KLKB1P03952 638 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 ERBB2P04626 1255 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 CYP17A1P05093 508 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 DCNP07585 359 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 SETSIPP0DME0 302 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 IRF1P10914 325 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 AOC1P19801 751 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 GNA15P30679 374 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TUBP50607 506 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TKTL1P51854 596 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 STARD6P59095 220 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 PDCLQ13371 301 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 DRAP1Q14919 205 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TAF5Q15542 800 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TPD52L1Q16890 204 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 ARHGAP15Q53QZ3 475 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM114A1Q8IWE2 563 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 BBS7Q8IWZ6 715 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 CCDC150Q8NCX0 1101 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 C1orf131Q8NDD1 294 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 PJA1Q8NG27 643 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 OVCA2Q8WZ82 227 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 GCNAQ96QF7 691 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 ERGIC2Q96RQ1 377 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 CPXM1Q96SM3 734 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 PCDHB18PQ96TA0 734 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 KLF16Q9BXK1 252 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 LINC00597Q9H2U6 94 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 EBF3Q9H4W6 596 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 KIF9Q9HAQ2 790 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM207AQ9NSI2 230 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 RBM12Q9NTZ6 932 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TDP1Q9NUW8 608 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 TRPM5Q9NZQ8 1165 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 CFAP97Q9P2B7 532 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 WNT16Q9UBV4 365 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 HCN2Q9UL51 889 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 PIAS3Q9Y6X2 628 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 GPR179Q6PRD1 2367 aa7.57□□□□□ -1.2
TOPBP1-207ENST00000509162 MYOFQ9NZM1 2061 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 WDR87Q6ZQQ6 2873 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 I6L893 689 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 THAP12O43422 761 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 ICMTO60725 284 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 LETM1O95202 739 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 IGLV3-25P01717 112 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 MBL2P11226 248 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TDGF1P13385 188 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 RARGP13631 454 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 HDCP19113 662 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 CDH5P33151 784 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 OPRD1P41143 372 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 ZNF165P49910 485 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 SGSHP51688 502 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 YWHAGP61981 247 aaKnown RBP eCLIP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 FMO1Q01740 532 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 RAPGEF1Q13905 1077 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 CNGA2Q16280 664 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 MEA1Q16626 185 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 SLC44A4Q53GD3 710 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 RAB6CQ53S08 254 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 DNAAF5Q86Y56 855 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 CELF5Q8N6W0 485 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 FLCNQ8NFG4 579 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms